| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4729 |
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| Symbol | |
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| ID | 4070667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5592206 |
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| End bp | 5593570 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986773 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_593802 |
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| Protein GI | 94971754 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.622363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTCG ACGACACGAT TGTCGCGATT GCAACTCCGC CGGGCCGCGG AGGGATTGGC
GTCGTGCGCC TTGCCGGCCC CGAGGCGCGA ACTGTCGCGC TTCTTATGCT TCGTCTCGCG
AATGGGAAAG CAGAGCTCGA AGCACAGCGC GCGCACTTCG CGGAGCTAGT GGACCCCGAA
TCCGGCGAAC GCCTCGACGA AGTCGTCGTC GCCTACTTCG CCAAGCCGCA TTCTTATACG
ACGGACGATA TCGTCGAGAT TTCCTGCCAT GGGTCACCGG TACTGCTGGC CCGCGTCGTG
GAGCTTGCGC TGGCGAAAGG TGTGCGCATG GCCGATCCCG GCGAGTTCAC AATGCGCGCG
TTCCTCAATG GCCGTATTGA CCTTACTCAA GCCGAAGCGG TGCGCGACCT GATTGAGTCG
CAGACGCTCT ACCAGGCGAG AGTCGCCGCG CAACAACTCG GAGGCTCGGT GTCGCGAAGG
CTTCAGCCCA CAAAGCAGAA GCTGGTGAAT TTGATTGCCG TGCTCGAAGC CGGCATCGAC
TTCGCCGACG ACGATGTCTC GGTTCTTCCA GCGAAGGAAG CCATCGCACG AATTGCTGAG
GTGCATGAAC CGCTCGCCAA GCTGAAAGAG GGCTTCGCGT TCGGCAAGGT AGTGCACGAG
GGACTGACGC TCGCGATTGT AGGCCGTCCG AACGTGGGCA AGTCCAGCCT GTTTAACCGC
CTTGTTGAGC GCGACCGCGC CATCGTCACC GCAATTCCCG GCACCACGCG CGATCTCGTC
ACCGAGACCG TGTCTCTGGG TGGTATCCCC GTGCATCTTG TGGATACTGC CGGCATCCGC
GAGTCGCACG ATGAGGCAGA GAGCATCGGA ATCCAGAAAT CGCGCGAAGC TATGGCTGAC
GCGGATCTCG TGCTTGTTGT CGTTGACGCT CACGCCGAGA CCGGACACGA ACTCGACCAC
CAACTAATCT CGGCTGCAGC CGAGCGCAGT GCAATTCTCG TTGAAAACAA AATTGATCTC
GGCCGTCACT CGGTTGCAAA CGGGAAGTCC ATTCCTGTGG TCCGTACCTC GGCGGTGAGC
GGTGAAGGCA TAGCTGAATT GCGCGAGCAG ATCCTGCGGA TGGTCTCCGG CGAATCGGGA
CGGGAAGAAA GCGGATTCCT CACCAACATT CGCCAACACC AGCTTGTTAC CGACTCGCTC
GCAGCACTCG AGGCCGCGAC CAATGCACTC GAAGTGCGCG TGCCGCACGA AATGGTGCTG
ATGGACCTCT ACAACGCTTT GCGTCCACTG GACGATATCA CCGGTGCAAC CACCGCCGAC
GACATCCTGA ACTTGATCTT TTCGACTTTC TGCATCGGGA AGTGA
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| Protein sequence | MNLDDTIVAI ATPPGRGGIG VVRLAGPEAR TVALLMLRLA NGKAELEAQR AHFAELVDPE
SGERLDEVVV AYFAKPHSYT TDDIVEISCH GSPVLLARVV ELALAKGVRM ADPGEFTMRA
FLNGRIDLTQ AEAVRDLIES QTLYQARVAA QQLGGSVSRR LQPTKQKLVN LIAVLEAGID
FADDDVSVLP AKEAIARIAE VHEPLAKLKE GFAFGKVVHE GLTLAIVGRP NVGKSSLFNR
LVERDRAIVT AIPGTTRDLV TETVSLGGIP VHLVDTAGIR ESHDEAESIG IQKSREAMAD
ADLVLVVVDA HAETGHELDH QLISAAAERS AILVENKIDL GRHSVANGKS IPVVRTSAVS
GEGIAELREQ ILRMVSGESG REESGFLTNI RQHQLVTDSL AALEAATNAL EVRVPHEMVL
MDLYNALRPL DDITGATTAD DILNLIFSTF CIGK
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