Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4645 |
Symbol | |
ID | 4070802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5503522 |
End bp | 5504571 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637986685 |
Product | TPR repeat-containing protein |
Protein accession | YP_593719 |
Protein GI | 94971671 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.656867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAGC AAGCACTAAT CCTATTCTTC GTCGCGCTCG TGCTGGGGAT GGTCCCGGCT GCGATGGCGC AAACCGGTAC CGTGAAAGGC TATGTCAAAG ACAAGGGCAC GCCGATCGTG GGCGCGCAGG TCTTGTTCGA GAATCTTGAC AACGGCCGCA AGATGACCCT GAAGACCGAC AAGGCCGGCA ACTTCTTCAG CATCGGCGTC GCCATCGGTA GCTACAAGAT CACCATCACC GCCGACGGCA AAACCATCTG GAACACTGCG AAGTATCCGG TCGGCGGCGG CGACGGCAAT CCCGAGTTGA ACATCGACTT GGAGAAGGAA CGCGCCGCAC AGGCAACCGC CAATCCGGCC AATGCGGAAG CGGTGAAGAA GGCGGAAGAG AACAAGAAAG AGAATGAGAA GATCGGCAAC CTCAACACCA TGTTGAAGGA AGCCCAAGCC GATATGCAGG CCAAGAACTT TGACGCGGCG ATCCAGATCA TGGAGAAGGC GACCGCGCAA GACGCAACCC ATGACATCAT CTGGGCCGTT CTCGCCGATG CGTATCTCGG CGCGAAAAGA TACCCTGACG CGGTGAAAGC CTACGAAAAG GCGATCGCGC TCGATCCCAG CAAAGCGCCC GTGCATAACA ACTATGCGCA GGCACTTGCC AAGACAGGAC AGTCGGACAA GGCCATCGCC GAGTACGATG CGGCTGCCAA GCTCGATCCA GCCCATGCCG GCTCGTTCTA CTTCAATGAA GGCGCCGTCT TGACCAATGC TGGAAAGACC GACGACGCCA ACGCGGCCTT CGATAAAGCG ATCGCTGCCG ATCCCACCAA GGCAGACGCC TATTACCAGA AGGGCGTGAA CCTGATGGGC AAGGCGACGC AGAAGGACGG GAAGTATGTT GCGGCGCCGG GCACCGTCGA GGCCTTCAAC AAGTACCTCG AACTGTCCCC TGACGGACCG AACGCTCAGA ACGCGAAAGA TATGATCGCG GCTCTTGGCG GCACAGTCGT CACCGGCTAC AAGGCCGAAA AGGGCAAGAA GAGCAAGTAG
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Protein sequence | MRKQALILFF VALVLGMVPA AMAQTGTVKG YVKDKGTPIV GAQVLFENLD NGRKMTLKTD KAGNFFSIGV AIGSYKITIT ADGKTIWNTA KYPVGGGDGN PELNIDLEKE RAAQATANPA NAEAVKKAEE NKKENEKIGN LNTMLKEAQA DMQAKNFDAA IQIMEKATAQ DATHDIIWAV LADAYLGAKR YPDAVKAYEK AIALDPSKAP VHNNYAQALA KTGQSDKAIA EYDAAAKLDP AHAGSFYFNE GAVLTNAGKT DDANAAFDKA IAADPTKADA YYQKGVNLMG KATQKDGKYV AAPGTVEAFN KYLELSPDGP NAQNAKDMIA ALGGTVVTGY KAEKGKKSK
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