| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4601 |
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| Symbol | |
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| ID | 4071546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5448410 |
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| End bp | 5449606 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637986641 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_593675 |
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| Protein GI | 94971627 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.458402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGA TCGGGGCTGT GTGCTTGTTG TCGTTGTGCG CGAGCGTTTT TGCGCAGGAC
CTTTCGGACA AGGCGGAGTA CGACAAGCTG AAAGCGCACG CGACGGAGCT CTTCAATCAG
AACAATTTCC TCGCAGCTTT GCCGGAGCTC CAAAAACTCG CAGACCAGAA CCCGAAAGAT
TATGCAGTGC TGGAGGCGCT AGGTTTTGCG CTCGCCAGCA AAGCGCTTCT GGAAACCGAT
GCCGACCAGC GTAAGGCCGA CCGCATTGCT GCGCGCAAGC ACCTGCTGGA GGCCAAAAAA
CTCGGCGATA ACAGCGAGAT GATCAACTAC CTGCTAGAAA CGACCCCGGA AGACGGCACC
CCGCGAAAGT TCTCCGACAA CAAAGAGATC GAACGGCTGA TGCAAACCGC CGAAGCGCAT
TTTGCGAAGG GAGAACTCAA CGAGGCAAAG GCCGGATATC TCCAGGTGCT GCTGCTCGAT
CCCGAGAATT ATGCAGCGGC GTTGTTCACT GGAGATGTGT ATTTCAAGGA TGGCAAGTAC
TGCAGCTCCA TCCAGTGGTT CCAGAAAGCG ATTGAGATAG ACGCCAACAC CGAAACCGCC
TACCGATACT GGGGCGATGC ACTCGACCAC CTGGGCCAGA AAGACGAAGC GCGACGAAAG
TTTATGGAGG CGGTGATCGC CGACCCGTAC AACAATCGTC CATGGCAACA CTTGTACCAG
TGGATGAAAA CGCAGGGCCA CGAACTGACG GTTCCCAAGA TACAACCGCA GGCCTCGGTG
AACGTGGAAT CGGACAAGAA AATCAATATT ACGGTGAACT CAGGTAGCGT CGAGAAGCAC
GATGGCAGCG CTGCGTGGAT GACATATGGA ATCGGCCGCG CGGCTTGGCA AGGTGAGAGG
TTCAAGAAGG AATTTCCGAA CGAGCCGAAG TATCGCCACA CGCTGCGCGA GGAGAATCAT
GCACTCTCGC TCGTCGTAAG CTCGGTGAAG AGTCAAAAAG ACATCAAACA GCTTGACCCG
CAGCTCGCAA CACTGGTGAA GATATCCGAC GCCGGACTGC TCGAGCCGTA CATCCTGCTC
AATGCGGCAG ACCAAGGCAT TGCCCAAGAC TACGCGCCGT ATCGCAAGGA ACACCGCGAT
CTGCTCTACA AATATCTCGA TACGATTGTT GTCCCGCAGT TGAAGCCGGG GCTCTAG
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| Protein sequence | MRLIGAVCLL SLCASVFAQD LSDKAEYDKL KAHATELFNQ NNFLAALPEL QKLADQNPKD
YAVLEALGFA LASKALLETD ADQRKADRIA ARKHLLEAKK LGDNSEMINY LLETTPEDGT
PRKFSDNKEI ERLMQTAEAH FAKGELNEAK AGYLQVLLLD PENYAAALFT GDVYFKDGKY
CSSIQWFQKA IEIDANTETA YRYWGDALDH LGQKDEARRK FMEAVIADPY NNRPWQHLYQ
WMKTQGHELT VPKIQPQASV NVESDKKINI TVNSGSVEKH DGSAAWMTYG IGRAAWQGER
FKKEFPNEPK YRHTLREENH ALSLVVSSVK SQKDIKQLDP QLATLVKISD AGLLEPYILL
NAADQGIAQD YAPYRKEHRD LLYKYLDTIV VPQLKPGL
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