Gene Acid345_4553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4553 
Symbol 
ID4071498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5398175 
End bp5398684 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content60% 
IMG OID637986593 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_593627 
Protein GI94971579 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.483632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.194042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATA CACCGCTTGT GTCCATTGTT ATGGGCAGTG ATTCCGATTT GGAGATCATG 
AACGAAGCCG CGAAGGCGCT CGAGGGCTTC GGGATTGCGT ATGAAATTGA CATCACGTCG
GCGCACCGTT CGCCGGCACG CACCAGCGAA TACTCGCGCG CGCTGGTTTC GCGTGGCGTG
AAGGTTGTGA TTGCCGGCGC AGGTGGCGCG GCACACCTTG CAGGCGTGAT TGCCGCTGAG
ACGACCCTGC CGGTAATTGC CGTGCCGATT CCATCCACGG CGCTGCTCGG CCTCGATTCG
CTGTTAGCGA TGGTGCAGAT GCCTGCGGGC ATTCCCTGCG CGACCGTGGC GATCGGCAAG
CCGGGTGCGA CGAATGCCGG CATTCTCGCG GCACAGATCA TCGGGACGCA TGATGCGGGC
GTTGCGAAGA AACTCGTGGC GCACAAAGAG AAGTTGGCCA AGGGCGTGGA AGAGAAGTCG
AAGAAGTTGA AGGAATCGGC GAAGAAGTAG
 
Protein sequence
MSDTPLVSIV MGSDSDLEIM NEAAKALEGF GIAYEIDITS AHRSPARTSE YSRALVSRGV 
KVVIAGAGGA AHLAGVIAAE TTLPVIAVPI PSTALLGLDS LLAMVQMPAG IPCATVAIGK
PGATNAGILA AQIIGTHDAG VAKKLVAHKE KLAKGVEEKS KKLKESAKK