Gene Acid345_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4397 
Symbol 
ID4073303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5223968 
End bp5224438 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content60% 
IMG OID637986430 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_593471 
Protein GI94971423 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGGAT TGGCGCTGCA CTTTCTGCGC GATCGCCCGG CAGCGGAAGA GATTGCGCAG 
GATGTTTTTC TCGCGCTGCA TAAGAATTTG CGGTCGGTAT CGTCAGACGA GCATGCGAAG
TATTGGCTGC GTCGGGTGAC GGTGCAACGG TGCATTGACC ACACGCGGCG GCGTCCGGCG
ATCGAGATGC CGCTGGAAGA TGCGCGTGAG ATCGGCGTGG CGCCAGTGGA GAACGATGTC
TTTGTGCGCG AGCGATTGCG TCGGTTGATT GGCGGACTCT CGCCGGATGC GCGGGCGGTG
ATGATCCTGA GATACCAGGA GGATTTATCG CCACCTGAGA TTGCAGCGAC GTTGTCGATG
CCGGTGGCGA CGGTTAAGAG CCACCTGCAG AGATCGCTGG GAGTGCTGCG GGAGAAGATG
GGAGTGGCGA CCACAGCGGG AACACCAGAT CCTTCGCTTC GCTCAGGATG A
 
Protein sequence
MFGLALHFLR DRPAAEEIAQ DVFLALHKNL RSVSSDEHAK YWLRRVTVQR CIDHTRRRPA 
IEMPLEDARE IGVAPVENDV FVRERLRRLI GGLSPDARAV MILRYQEDLS PPEIAATLSM
PVATVKSHLQ RSLGVLREKM GVATTAGTPD PSLRSG