Gene Acid345_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4315 
Symbol 
ID4071888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5125843 
End bp5126214 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content56% 
IMG OID637986348 
Productendoribonuclease L-PSP 
Protein accessionYP_593389 
Protein GI94971341 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.915809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA CGATCAATTT GCCGAGCCGG CGCAATAATC TGCCGTTTAG CGATGCCGTA 
CGCGTGGGGG AGACGGTGTA TCTTTCCGGG CGAATTGGCT TTAAGCCGGG AACCACGGAA
ATTCCAGCCG ATGCGGGTGA AGAAGCAAAG TACCTGCTCG ACGGAATACG CGAGGTGCTG
GAGCAGGCGG GCATGGTGAT GGACGACCTC GCCTATGTGC AGATTTTCAC ACCCGATGTC
TCGCTGTTTG ACACCTTCAA TAAGGTGTAT GCGACCTACT TTGAAGAGGA GTTCCCGGCG
CGGGCTTTCC TGGGATCGGG GCCGCTATTA TTTGGCGCAC GCTTCGAGCT GATTGCAATC
GCGGCGAAGT AG
 
Protein sequence
MKSTINLPSR RNNLPFSDAV RVGETVYLSG RIGFKPGTTE IPADAGEEAK YLLDGIREVL 
EQAGMVMDDL AYVQIFTPDV SLFDTFNKVY ATYFEEEFPA RAFLGSGPLL FGARFELIAI
AAK