| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4284 |
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| Symbol | |
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| ID | 4071857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5091274 |
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| End bp | 5093889 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637986317 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_593358 |
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| Protein GI | 94971310 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCTGA ATGACATGCT CTTCCGGCTG CGCGCGCTTT TCCGTCGCAA TGCCGGCGAT
AGGGAACTCG ATGACGAGTT GCGCTTCCAC CTCGAACGAC AGACCGCGAA ATATGTAAAG
TCGGGAATGA GCGAAGCCGA AGCTGCGCGT CGTGCCCGGC TGGAGTTTGG CGGACTCGAT
CAGGTCAAAG AAGAGTGTCA CGAAGCGCGC GGCATCAGCT TCATCGAGAC GCTGCTCCAG
GACACGCGTT ACGCCATTCG CACTCTGCTC CGTGCACCCG CGTTTACCGC TTGCGCCGTC
CTGACGCTGG CCCTCGGCAT CGGCGCCAAC ACGGCGATCT TCAGCGTAGT CAATAGTGTT
TTGCTCAATC CGCTCGGATA CCCCGATCCG CAGGAACTGC TGGCGGCCCG TCAGAATGAA
GCGCTCGCGA ATCTAGCGGA CATGCAGCGT CAGACCCACG CTTTTTCCAG CAGCGGCGGC
GTCAACATCA ATCCCATGGA CTTCACCGGC CAAGGTGAGC CCGTGCGCAT TCACGCCGCC
TTTGTGGATG CCGGCCTCTT CCCAACCCTC GGCGTCCAGC CCATGTTGGG CCGTTGGATC
TCACCCGATG AAGATGTGAA AGGCGGTCCA CGGAACGCCG TGGTGAGCTA CGCGTTCTGG
CGCGACTTCC TCGGTAGCGA CCCGCATGTC CTGGGCAAGA CGATCGGACT CGGCGGCAGC
AGTTACGCCG TCATCGGCGT GATGCCCAAA GATTTCACCC TGCCGAAAGA ATTAGCCGAT
GTCTTCCTCT CGTTGTGGGT CGCGTACCCC GAGGCTGCTC CCGAGCGCGG CGTCCACTTC
CTGCACACTT ACTGGCGACT AAAGCCCGGC GTCACCATCC AGCAGGCGCA AGCCGAAATC
ACCCAGGCCG ACCACCGTCT CGCCGAGGCT TTCCCCGACA CCGAAAAAGA ACGCGGCACC
GTTCTCGTGC CGCTGCACGA GTCGCTCGTA GGCGACGTCC GCCCCGCGTT GCTGGTTCTG
TTCGGAGCAG TTGGCCTTGT GCTGCTGATT GCCTGCGCGA ACTTCGCAAT GCTGCTGATG
GCCCGTGCTG TGTCGCGTCA GCGTGAGCTG ATGATCCGCG CCTCGCTGGG CGCGCGCAAC
AGTCGCCTGA TTCGCCAGCG CCTCACCGAG AGCACGCTGT TGGCGCTCGT CGGCGGAGCT
GCCGGCCTGG TGGTTGCGAA ACTCGGCGCA ACGGTGTTGC TCGCCATGAA ACCCGCGGCA
CTCCGTCACT TCGGCGCCAT TCACATGGAC GCCCGCGTCT TCCTCTTCGT CTTCGCCGTC
TCGCTGCTCA CCGGCCTCGT CTTCGGACTC ATGCCGGCCT GGTCCTCATC GCGCGGAGAT
ATTTCTGAAG CCCTGCGCGA GAACGCTCGC ACCGCCACGG CTTCGCGCAG TCCGTTGCGC
AGTTTCCTGG TCACCGCGGA ACTCGCGCTG GCGCTCATTC TGCTGGCTGG CGCGGGATTG
CTGATCAAAG GCTTCCTCCG CTTGCGGTCG GTAGATCCCG GATTCAATCC GTCGAACGTT
ATGACGATGT ACCTTCAGCT GCCGGGCACG CGCTATCCCA AGATTCCGTC GCAGAACGTT
TTCCGCCGTG AGTTGCTTGC GCGAATCAAC GCCTTCCCCG GTGTCGAGGC CGCGATGATC
ACCGATCTCC CCTTGGCAGG AAATTATGTC GCTCACCGCG TGGTGGTCAA CGGCCAGCCG
GCTCCCGCGC TCGGCGCCGA ACCCATGGTG CAGGTGCTGT CGGTGATGGG AAATTATTTC
GGCGTCATGC AAACTCCCCT TCGTGCCGGA CGCGACTTCA CCCCCACCGA CCGCGAAGGT
CAACCGAGGG TAGCGATCGT CAACCAGGCA TTCGTGCGCC AGCTTCTTCC CGGCCAGGAC
CCCATCGGTA CGCGCATCAA CTGGGCGAGG GCTGATGATC CTAACGACTG GTTCACCATC
GTCGGCGTTG TCGGCGACGT GAAGCATGAC GGACTGAACC AGCCCGTCGA TCCTGCCATG
TACTCTCCGT TCAGCCAGAA TGACGAAGCG TGGCGCAAGT GGATGACCCT CGTCATCCGC
ACCCGCGTCC CGGCAGCGGC GCTCGTCGAG GACGTGAAGA AGCAGGTCTG GAGCCTCGAT
AGCCAGATCC CGGTCAGCAG CATTCAATCC ATGGACGACC TGTTGGCGGT CTCCGTCGCG
CAGGAGCGCT TCAACATGTT GTTGCTCGGC ATGTTTGCTG CGCTCGCAGT GGCGCTCGCG
GGAGTGGGCA TCTACGGCAT GGTTGCGTAC CGCGTCAATC AGCGCACCCA CGAGATCGGC
GTTTACATCG CGCTGGGCGC GCAGCATCGC GATGTCCTGC GTCTGGTGAT GAAGGACGGC
GTGAAGCTCG CGCTGATCGG CATTGGGTGC GGGCTTGCGG GCGCAGCCGC ATTAACGCGG
CTGATGGTGA GCTTGTTGTT TGAAGTAAAG CCCACCGATC CCGTAACCCT GATTGGCGTA
GCGTTGCTGC TGGCGGCCGT CGCAATGCTG GCGTGCTACA TCCCGGCACG CCGTGCGCTA
GGCATTCATC CGATGACCGC ACTGCGTCAC GAATAA
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| Protein sequence | MFLNDMLFRL RALFRRNAGD RELDDELRFH LERQTAKYVK SGMSEAEAAR RARLEFGGLD
QVKEECHEAR GISFIETLLQ DTRYAIRTLL RAPAFTACAV LTLALGIGAN TAIFSVVNSV
LLNPLGYPDP QELLAARQNE ALANLADMQR QTHAFSSSGG VNINPMDFTG QGEPVRIHAA
FVDAGLFPTL GVQPMLGRWI SPDEDVKGGP RNAVVSYAFW RDFLGSDPHV LGKTIGLGGS
SYAVIGVMPK DFTLPKELAD VFLSLWVAYP EAAPERGVHF LHTYWRLKPG VTIQQAQAEI
TQADHRLAEA FPDTEKERGT VLVPLHESLV GDVRPALLVL FGAVGLVLLI ACANFAMLLM
ARAVSRQREL MIRASLGARN SRLIRQRLTE STLLALVGGA AGLVVAKLGA TVLLAMKPAA
LRHFGAIHMD ARVFLFVFAV SLLTGLVFGL MPAWSSSRGD ISEALRENAR TATASRSPLR
SFLVTAELAL ALILLAGAGL LIKGFLRLRS VDPGFNPSNV MTMYLQLPGT RYPKIPSQNV
FRRELLARIN AFPGVEAAMI TDLPLAGNYV AHRVVVNGQP APALGAEPMV QVLSVMGNYF
GVMQTPLRAG RDFTPTDREG QPRVAIVNQA FVRQLLPGQD PIGTRINWAR ADDPNDWFTI
VGVVGDVKHD GLNQPVDPAM YSPFSQNDEA WRKWMTLVIR TRVPAAALVE DVKKQVWSLD
SQIPVSSIQS MDDLLAVSVA QERFNMLLLG MFAALAVALA GVGIYGMVAY RVNQRTHEIG
VYIALGAQHR DVLRLVMKDG VKLALIGIGC GLAGAAALTR LMVSLLFEVK PTDPVTLIGV
ALLLAAVAML ACYIPARRAL GIHPMTALRH E
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