Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4191 |
Symbol | |
ID | 4072150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4963242 |
End bp | 4964402 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637986222 |
Product | beta-lactamase |
Protein accession | YP_593265 |
Protein GI | 94971217 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.249358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATTC TTCTAGCGCT CCTGCTTTTA TCAGTTGTTG CCTTTGCGCA GCTTCCAGCC AACGAACTTA AGAAGTTCTA CGAAGACGGT CTTAAGCAGC ACGGCATTGT CGGCAGCTCG CTTGCCGTCC TTGATCACAA CAAGATCGTC TTTCGAGATA CCGTCGGCTT TCAGGATCTC GTCTCCAAAA CGCCAGTGGA CGAGAACACC ACCTTCCATT GGGCGTCGGT GAGCAAAACC TTCACCGGCA TTGCGATCAT GCAGCTCCGC GATCGAGGGC TGCTCTCGCT CGACGACCCG ATCGTGAAAT ATGTCCCCGA GATCGCGCAG GCGCACGATC CTTTCGGCCC GATCTCGGCG ATCACGATTC GCCAGGCGAT GTCCCACTCC GCGGGCTTCC GCGATCCCAC GTGGCCGTGG CGCGATGCCG ACTGGCAGCC CTTCGAACCG ACCGAGTGGT CGCAACTCGT CGCGATGATG CCGTACACCG CGGTCGAGTT CCAGCCCGGC TCGAAGTACA GCTACTCGAA TCTCGCAGTC GTCTTCCTCG GTGAGATCAT CGAGCGGCTC TCGGGTGATC CTTATGAAGC CTACATGGAG AAGAATGTCC TTCGTCCGCT CGGGATGGAA CACTCCTACT ACGATCGCAG CCCGGCATAT TTGTTGAAGC ACCACTCGCA CAGCTATCAC ATAGAAAAGG GCAAGCTCGC TGAGCTGGAG TTTAACTTCG ACACCGGTAT TACCCGCTCG AACGGCGGCC TCAATTCCCC GATCCCAGAC ATGATCAAGT ACCTGAACTT CCTTGTCGGC GATCCGGCCC GCCGAGCCGA GTACGACGCG GTCTTAAAGC GCTCTTCACT GGAAGAGATG TGGAAACCAT TGTTGCCGGT TCCGGTGAGC GAAGACTTCC CATCACGCAA GGGTGCGCGC GACTTCGTCA CCACCAGTTT CTTCGTTCAC GAAGACAACG ATCTCAAACT CATTGGACAC ATGGGCTGGC AGAATGGATT CATCGCGCAC ATCTATATTG ATCCGCAGCA GAAGAAGGCC TACGTCGTTA ACTACAACAC CGAAGCTATG GACGCCGAAC AGAACACGCG CAAGCTCAAT GAACAGTTGC GCGATTTCTT AATCGACAAT TTCTTCGCGC CGAAGAAGTA G
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Protein sequence | MRILLALLLL SVVAFAQLPA NELKKFYEDG LKQHGIVGSS LAVLDHNKIV FRDTVGFQDL VSKTPVDENT TFHWASVSKT FTGIAIMQLR DRGLLSLDDP IVKYVPEIAQ AHDPFGPISA ITIRQAMSHS AGFRDPTWPW RDADWQPFEP TEWSQLVAMM PYTAVEFQPG SKYSYSNLAV VFLGEIIERL SGDPYEAYME KNVLRPLGME HSYYDRSPAY LLKHHSHSYH IEKGKLAELE FNFDTGITRS NGGLNSPIPD MIKYLNFLVG DPARRAEYDA VLKRSSLEEM WKPLLPVPVS EDFPSRKGAR DFVTTSFFVH EDNDLKLIGH MGWQNGFIAH IYIDPQQKKA YVVNYNTEAM DAEQNTRKLN EQLRDFLIDN FFAPKK
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