Gene Acid345_4191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4191 
Symbol 
ID4072150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4963242 
End bp4964402 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content56% 
IMG OID637986222 
Productbeta-lactamase 
Protein accessionYP_593265 
Protein GI94971217 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.249358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTC TTCTAGCGCT CCTGCTTTTA TCAGTTGTTG CCTTTGCGCA GCTTCCAGCC 
AACGAACTTA AGAAGTTCTA CGAAGACGGT CTTAAGCAGC ACGGCATTGT CGGCAGCTCG
CTTGCCGTCC TTGATCACAA CAAGATCGTC TTTCGAGATA CCGTCGGCTT TCAGGATCTC
GTCTCCAAAA CGCCAGTGGA CGAGAACACC ACCTTCCATT GGGCGTCGGT GAGCAAAACC
TTCACCGGCA TTGCGATCAT GCAGCTCCGC GATCGAGGGC TGCTCTCGCT CGACGACCCG
ATCGTGAAAT ATGTCCCCGA GATCGCGCAG GCGCACGATC CTTTCGGCCC GATCTCGGCG
ATCACGATTC GCCAGGCGAT GTCCCACTCC GCGGGCTTCC GCGATCCCAC GTGGCCGTGG
CGCGATGCCG ACTGGCAGCC CTTCGAACCG ACCGAGTGGT CGCAACTCGT CGCGATGATG
CCGTACACCG CGGTCGAGTT CCAGCCCGGC TCGAAGTACA GCTACTCGAA TCTCGCAGTC
GTCTTCCTCG GTGAGATCAT CGAGCGGCTC TCGGGTGATC CTTATGAAGC CTACATGGAG
AAGAATGTCC TTCGTCCGCT CGGGATGGAA CACTCCTACT ACGATCGCAG CCCGGCATAT
TTGTTGAAGC ACCACTCGCA CAGCTATCAC ATAGAAAAGG GCAAGCTCGC TGAGCTGGAG
TTTAACTTCG ACACCGGTAT TACCCGCTCG AACGGCGGCC TCAATTCCCC GATCCCAGAC
ATGATCAAGT ACCTGAACTT CCTTGTCGGC GATCCGGCCC GCCGAGCCGA GTACGACGCG
GTCTTAAAGC GCTCTTCACT GGAAGAGATG TGGAAACCAT TGTTGCCGGT TCCGGTGAGC
GAAGACTTCC CATCACGCAA GGGTGCGCGC GACTTCGTCA CCACCAGTTT CTTCGTTCAC
GAAGACAACG ATCTCAAACT CATTGGACAC ATGGGCTGGC AGAATGGATT CATCGCGCAC
ATCTATATTG ATCCGCAGCA GAAGAAGGCC TACGTCGTTA ACTACAACAC CGAAGCTATG
GACGCCGAAC AGAACACGCG CAAGCTCAAT GAACAGTTGC GCGATTTCTT AATCGACAAT
TTCTTCGCGC CGAAGAAGTA G
 
Protein sequence
MRILLALLLL SVVAFAQLPA NELKKFYEDG LKQHGIVGSS LAVLDHNKIV FRDTVGFQDL 
VSKTPVDENT TFHWASVSKT FTGIAIMQLR DRGLLSLDDP IVKYVPEIAQ AHDPFGPISA
ITIRQAMSHS AGFRDPTWPW RDADWQPFEP TEWSQLVAMM PYTAVEFQPG SKYSYSNLAV
VFLGEIIERL SGDPYEAYME KNVLRPLGME HSYYDRSPAY LLKHHSHSYH IEKGKLAELE
FNFDTGITRS NGGLNSPIPD MIKYLNFLVG DPARRAEYDA VLKRSSLEEM WKPLLPVPVS
EDFPSRKGAR DFVTTSFFVH EDNDLKLIGH MGWQNGFIAH IYIDPQQKKA YVVNYNTEAM
DAEQNTRKLN EQLRDFLIDN FFAPKK