Gene Acid345_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4001 
Symbol 
ID4071137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4728254 
End bp4728688 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content56% 
IMG OID637986028 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_593075 
Protein GI94971027 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGC TTCCAAGCAA CTCCAATAGC CCCAAAGCCG AAATGAACGT CACGCCGCTC 
ATCGACGTAT TGCTCGTCTT GCTGATTATT TACATGGTGA TAACGCCGCT GAATTCGCAG
GGTTTAAAGG CCTTGATCCC CCAGCCGACG CAACCCAATT CCCCTGCCGC GCCGCATGAG
AATGACGCCG TCGTGGTGCA GGTGCTTGCC GGGAACGGCG ATACTTTGCT GAAAATCAAC
AATGAAAGTG TCACTTGGGA AGGGCTGGAA CCGCGACTCA AGGCGATCTT CGCGCCTCGT
GTCGAACGCG TGGTTTTCGT AAAAGGCGAT GCAAGCGTTG AGTTCGAACA AGTCGCGCGA
GTGGTCAGTC TCGCGCACAG CGCGGGAATC GATCACGTTG GGTTGCTGAC GGCGAAGGTT
GAGTCGGCGC GCTAG
 
Protein sequence
MAMLPSNSNS PKAEMNVTPL IDVLLVLLII YMVITPLNSQ GLKALIPQPT QPNSPAAPHE 
NDAVVVQVLA GNGDTLLKIN NESVTWEGLE PRLKAIFAPR VERVVFVKGD ASVEFEQVAR
VVSLAHSAGI DHVGLLTAKV ESAR