Gene Acid345_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3953 
Symbol 
ID4072425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4676210 
End bp4676773 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID637985979 
Producthypothetical protein 
Protein accessionYP_593027 
Protein GI94970979 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.113123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.361845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC TTTCGCTTCT CGCTATCGTC CTGCTGGCAT TCGCATTTCC CGGGAATGCC 
CAGGACTCAA TTAAAAAACA TCCAGCCGTC AAACCTGCCG ATCCGGAATT GAAAGTCGTG
CTCGATTCCT GGAATGACAT TGGCCGCAAG CTCACCGAGA TGGCCGAAGA TTTCCCGGAG
GACAAATATG ACTTCAAGCC AACCCCCGCG CAGCGCAGCT TCGCCGAGCA GTTGCTGCAC
GCGGCCGGTT CAACCTACTA CTTCACCAAT CCAGCGATGG GGCTGAAGCC TCCCGCGGCA
GAAGATCCGA AGCGTGACCA GTACAAAACC AAGGCCGATA TCGTCGCCTT CGTAAAGAAA
TCCTTTGCCG ACGGAGCCGC CGCCATCCAG TCGAAAGGCG ACAAAGGCCT GTTGACGGAG
GTCGTTTATT TGCCTGACCA GAAAGCGCGC GTTCTCGACA TCGCATACGG CCTCATCGAA
CATAGCGGTG AACACTACGG CCAGCTCGTT GTGTACTACC GCCTCGCAGG CCTTGTGCCT
CCGGAGTCGC GGCCCAAGAA GTAA
 
Protein sequence
MKRLSLLAIV LLAFAFPGNA QDSIKKHPAV KPADPELKVV LDSWNDIGRK LTEMAEDFPE 
DKYDFKPTPA QRSFAEQLLH AAGSTYYFTN PAMGLKPPAA EDPKRDQYKT KADIVAFVKK
SFADGAAAIQ SKGDKGLLTE VVYLPDQKAR VLDIAYGLIE HSGEHYGQLV VYYRLAGLVP
PESRPKK