| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3941 |
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| Symbol | |
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| ID | 4071324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4662323 |
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| End bp | 4663300 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637985967 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_593015 |
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| Protein GI | 94970967 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.652305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA TTTACCTAGG TGTTCTTTTC ATCGCAGCGT TTGCGATGCA ACTTGCGGCC
CAAGCTCCGG CGAGCATCCC GAAGGTGACA GACCTCTCCG TGCGCGTGGT TTTCGAGAAC
GGGCGTTCCG CTGGACCTAA CAATCGCGTC GAGGTATTGG GCCAGTACGG AGGCAGCGTG
ACCTCTGGAT CTACGGATAC GTCGGGCCAG GTGACGTTTC CAAGGATGGA CCCGGGCAAC
TACAGATTGC GAGTGTCGGG ACCCGGAATC GTGACGACGG AAACACCTGT CATTGACCTC
ACTGATGCAG GCCCGCGCTC CAACCAAACG GTGCCGGTGA AGCCGTCCGG CCAGATGGGC
GATTCGGCGC CGGGAGCGAC TGTGGACGCG AATATCCCAG CGGATGCTAG GAAAGAATTC
GATAAGGGCG AGGACAAGTC GCAAGGGAAA GATTACAACG CTGCGCGGGA GCATTTGGAA
AAAGCAGTCA CGATCTATCC CAAGTATGCG ATGGCCTACA ACGACCTGGG TTTGGTGTAC
ATGCACTTAA ACCAGGGCCC CAAGGCGGTG GAGGCGTTCA AGACGGCGGC GCAGTTGGAT
GAACATTTGA AACAGGCGAA CCTGTTTCTC GGCCAGTTCT ATTACGAGAA CCACCAGTTC
AAGGACGCCG AGCCGTATCT GGTTCATGCC ACCAAAGACG ATCCGAAGAA CGCACAGCTG
CTGCTGGCTC TTGCGAACAG CCAATTAAGG AATGGGCAGA ACGACGAAGC ACTCGCGACC
GCGCAGAAAG TGCATGCGTT GCCTGACCAT AAGAAATTCG CTGCAGCGCA TCTGATCGCT
GCCGAGGTAT ATGCCGACAA GGGCGACAAT CAGCACGCGA AAGACGAGTA TCACGTTTTC
CTGAAAGAAG ATTCCAACTC GCCGATGGCC CCCAAGGTGA AAGAAGCCCT GGCGAAATTG
GAAGCCCCGG CGAAGTAG
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| Protein sequence | MKPIYLGVLF IAAFAMQLAA QAPASIPKVT DLSVRVVFEN GRSAGPNNRV EVLGQYGGSV
TSGSTDTSGQ VTFPRMDPGN YRLRVSGPGI VTTETPVIDL TDAGPRSNQT VPVKPSGQMG
DSAPGATVDA NIPADARKEF DKGEDKSQGK DYNAAREHLE KAVTIYPKYA MAYNDLGLVY
MHLNQGPKAV EAFKTAAQLD EHLKQANLFL GQFYYENHQF KDAEPYLVHA TKDDPKNAQL
LLALANSQLR NGQNDEALAT AQKVHALPDH KKFAAAHLIA AEVYADKGDN QHAKDEYHVF
LKEDSNSPMA PKVKEALAKL EAPAK
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