Gene Acid345_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3877 
Symbol 
ID4072212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4586148 
End bp4586822 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID637985901 
ProductMOSC 
Protein accessionYP_592951 
Protein GI94970903 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.913671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTATC TTAAGAGCGT GACGACTCCA CACATTATTC AGTTGGCGAT TGGACGGCCG 
GAGAACCATG CTCCGGCGGG CGAAGAACCC TGGATCACGG CGATCTATCG CAAGCCGGTG
AGCGCAGCGG TTTTCTGCAC CAAGCTCGGG TTCGAAGGCG ATCAGGTCGC GAACCGGCGC
GTTCACGGCG GGCCGGACAA AGCGGTCCTT TGCTACGGCG CGTCGAACTA TCCCAAGTGG
CAGGCGGACG GTTTGCCGGC GGGTCCCGGC GGCTTCGGCG AGAATCTCAC GATCCAAGGT
TTGGACGAAG AGACCGTCTG CATTGGCGAT GTCTATCGGA TCGGCGAAGT CGAAGCCCAA
GTCTCGCAAC CGCGCGGGCC GTGCAACACG TTGGCGCACC GCTGGGGACG TCCGGATCTC
GTGAAAGTGG TGAAGGAGAA CCATCGCTCC GGTTGGTATC TCCGCATCCT GCGCGAAGGA
AAGATCGCGC CGGGGGATGT AGTGGAGTTG GTGTCGCGAC CGCATCCGGC GTGGAATATC
GCAAAGACTT CGGAGGTGAA TTATTCGCGC AATCGAAGCC TGGAAGATGT GCGCGAGCTG
GCGGGGTTAC CGGAGCTGTC CGTGAATTGG AGAAGCGACT TTGAGAAGAA GTTGGGGGCG
ATGGCGGGAA GGTAA
 
Protein sequence
MPYLKSVTTP HIIQLAIGRP ENHAPAGEEP WITAIYRKPV SAAVFCTKLG FEGDQVANRR 
VHGGPDKAVL CYGASNYPKW QADGLPAGPG GFGENLTIQG LDEETVCIGD VYRIGEVEAQ
VSQPRGPCNT LAHRWGRPDL VKVVKENHRS GWYLRILREG KIAPGDVVEL VSRPHPAWNI
AKTSEVNYSR NRSLEDVREL AGLPELSVNW RSDFEKKLGA MAGR