| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3833 |
|---|
| Symbol | |
|---|
| ID | 4071117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4534137 |
|---|
| End bp | 4534913 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637985856 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592907 |
|---|
| Protein GI | 94970859 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3375] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.181939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.494405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCCT CACAGTCCAG CCCAGGCGAT GCAGCGACGG CTGCCAGCGT GGTGATACGG
CCCTGCGCCA CTCCGGAAGA ATTTCGGGCG TGCGTGGAGG TGGAAACGGA AGTCTGGAAC
TTCGATGCAA GTGAGGCGGT GTCGCACCAC ATCATGGCGG TGGCACACGA GACCGGAGGC
CAGGTCTTCG GCGCTTTCGA CGGGCAACGC ATGATCGGCT TTGCGTTGGC GTTCCCTGCT
ATTCGCGACG GTCATGTCCA CTTGCATTCG CACATGGCTG CCGTGATCTC CGCCTACCAG
GAGCGTGGCA TCGGTCAGAT GCTGAAGCTG AAGCAGCGTG AGGAAGCTCT GTCGCGGGGG
ATCAAGCTGA TCGAGTGGAC GTTTGACCCG CTGCAAACAC GAAATGCAAA TTTCAATATC
CGCAGGTTGG GAGCGGTGGT GCGCCGGTAT CTTCCGAATT TTTACGGAGT GTCATCCAGT
CCTCTGCATT CCAATTTGCC GACGGACCGT CTGGTTGCCG CGTGGCACCT GGATTCAGGG
CGGGTGCGGG CTCATATTGC CGGTAAAGCA CATGAGCCTG GCGACAACCA ACGCAAGATT
TCTGTCCCGA AAAACATGAA CGAACTTCGC CATGCGGATC CTTCGAAAGC CGCGGAAATT
CAATTGGGTG TACGTCGGCA ATGCCAGGAT GCATTTGAGC AACAGTACAC AGTGACTGCA
TTTACAACCG ACGAAAACAA CGGCTATTTC ATTTTGGAAA AAAATTATGC GTATTGA
|
|---|
| Protein sequence | MQSSQSSPGD AATAASVVIR PCATPEEFRA CVEVETEVWN FDASEAVSHH IMAVAHETGG
QVFGAFDGQR MIGFALAFPA IRDGHVHLHS HMAAVISAYQ ERGIGQMLKL KQREEALSRG
IKLIEWTFDP LQTRNANFNI RRLGAVVRRY LPNFYGVSSS PLHSNLPTDR LVAAWHLDSG
RVRAHIAGKA HEPGDNQRKI SVPKNMNELR HADPSKAAEI QLGVRRQCQD AFEQQYTVTA
FTTDENNGYF ILEKNYAY
|
|---|
| |