Gene Acid345_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3570 
Symbol 
ID4072792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4219822 
End bp4220601 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID637985593 
ProductABC transporter, ATPase subunit 
Protein accessionYP_592645 
Protein GI94970597 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.339231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCCG CGATCGAGAC GCAGTCCCTC ACCCGCACTT TCGGCGCGTT CACCGCGGTC 
AACGCCATCA ACCTCACCGT TGCCCCCGGA CAATTCTTCG GATTCCTCGG CCCCAACGGC
GCCGGCAAAT CTACAACCAT CAAAATGCTC ACCGGCCTGC TCGCGCCGAC GTCGGGCTCG
ATCCGCATCC TCGGCCACGA CCTCACCGCG AACCCGGTCG AAGTGAAGCA GCAAATCGGC
GTTGTCCCCG AAGGCATGGC TCTCTTCGGA CGCCTCACCG GCCGCGAATA TCTCGAGTTC
GTCGGACGCA TGTACGGACT CGGCCGCGAC GTCTCCGCCC AACGAGCCGA CGAGCTTCTC
GACTTCATGC ACCTTGCCGA CGAGCCCAAG AAACTCGTTG CCGACTACTC GCACGGCATG
CAGAAAAAGA TCGCCCTCGC TGCCGCCGTC ATCCACGGCC CACGCGTTCT CTTTCTCGAC
GAGCCCTTCG AAGGCGTCGA CGCCATCGCG GCAGGCACCC TCAAAGCCAT GCTCCAGCAC
ATGATCACGC GTGGTGCGAC GATCTTTTTA ACCTCGCACG TGCTGGAAAT TGTCGAGCGC
CTCTGCTCGC ATGTCGCCAT CATTCATCAG GGAGCGCTCG TCGCGCAGGG TTCGTTAGAA
GAACTCCGCT CCGGCATCCA AACCGCCGGC ACCGAGAAAC TCACGCTCGA ACAAATCTTC
CTAAGCATCG TAGGCGGCGA CGCGCAATCT TCCGTCTCGG AACTCTCATG GCTCGCATAG
 
Protein sequence
MSPAIETQSL TRTFGAFTAV NAINLTVAPG QFFGFLGPNG AGKSTTIKML TGLLAPTSGS 
IRILGHDLTA NPVEVKQQIG VVPEGMALFG RLTGREYLEF VGRMYGLGRD VSAQRADELL
DFMHLADEPK KLVADYSHGM QKKIALAAAV IHGPRVLFLD EPFEGVDAIA AGTLKAMLQH
MITRGATIFL TSHVLEIVER LCSHVAIIHQ GALVAQGSLE ELRSGIQTAG TEKLTLEQIF
LSIVGGDAQS SVSELSWLA