Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3485 |
Symbol | |
ID | 4069061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4111024 |
End bp | 4111929 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637985507 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_592560 |
Protein GI | 94970512 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATAATC CGACCCGAAA AGAACCTCGC ACCGCTGCCG TTTTGCCGGT GCGAATCTAC GGCATGGATG CCTCCGGCAA GCCGTTCAAC GCAGTTGCGC ACACCCTCAA TGTCTCCAAG AGCGGCGGCC TGCTCGCGGG CGTCGAAGTA GCCCTTGTTG CCGGTGACCT CATCGGCGTG CAAAAAGGCG TTTATAAGAG CAAGTTCCGC GTCCGCTGGA TCGGCCGCAA AGGCTCTACT TCTCAGGGAC AGATCGGTAT CGAGTGCGTC GAAGGCCCAC GCAACATCTG GGGGGTGGAC GATCGTCCTC ACAAAGAGAA TCTCGAACCC TCGGCCGCTC TCAAACGCAA TAACTACAGT CCGACGACGG TCACCGGCAA CATCGAGCGC CGCATTGCGC CTCGCCATCC CTGCGACCTT GGGATCCAAA TCAGCCACGC TGGTTCGACA GTGAAATCGT GGGCACGTTG CACCGACATC AGCCCCGGCG GCTGTTACAT CGACACTCAC TCACCACTGC CGCCGAACAC AAACTTCGAG CTCACGATCT TCCTGGACGA ATCCATGCTC ATCCCTGCCC TAGTTCGTAC TTCGTTTCCG GGCATCGGTA TGGGCATCGA ATTTGCCTTC GCCAACGCTG ACGACGCAGA GCGCCTGAGC CGTTTGATCC GTGAGAAGAT CCTTGCACCC TCGACCGTTG AGCCAGAGCG AACGGACCTG CCTGCGTTGG AAAAACTTGC CGAAGCTTTA GAACAACTGC GCACCTGGGC CGCGGCTGCG ACACTGCAAA AGTCCGACCG CGATCAGCTC GAGCAGTTCG CAAATTCCTT GCGCGACGAT CTCATTGGTC TTCGCGCCGA ATTCGACGCC CGACTCGGCA CCACCGAAGT CAAAGTCGAG CGCTAA
|
Protein sequence | MHNPTRKEPR TAAVLPVRIY GMDASGKPFN AVAHTLNVSK SGGLLAGVEV ALVAGDLIGV QKGVYKSKFR VRWIGRKGST SQGQIGIECV EGPRNIWGVD DRPHKENLEP SAALKRNNYS PTTVTGNIER RIAPRHPCDL GIQISHAGST VKSWARCTDI SPGGCYIDTH SPLPPNTNFE LTIFLDESML IPALVRTSFP GIGMGIEFAF ANADDAERLS RLIREKILAP STVEPERTDL PALEKLAEAL EQLRTWAAAA TLQKSDRDQL EQFANSLRDD LIGLRAEFDA RLGTTEVKVE R
|
| |