Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3326 |
Symbol | |
ID | 4070288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3942777 |
End bp | 3945161 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637985348 |
Product | carbohydrate-binding family V/XII protein |
Protein accession | YP_592401 |
Protein GI | 94970353 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCAGAT TCATCTTGGT CTTTGTCGTA GTGTCTTCTT CCCTGCTCGT CGCCCAATCG CTTCCCGATG CACCCAGCGC CGTCGCCCAA AAAGGCGGGA CCGCCGCGCC AACTCCCGCG AAGCCCAAGC CGGCCGCAAC CACGCCGCAC GACAACGGCT GGCCACGCAC TGTCAAGCTC GACGAAAAGA CCAGCATCAC GCTCTACCAG CCGCAAGCCG ACAAATGGGA TGGCAATCGC CTCTATGTCT ATTCCGCTGT TGCCCTCAAT GAAGCCGGCG TCAAGACCCC GCGCTATGGC GTTGTTTCCT TCAACGCGCG CACCGAGGTG GACAAGATCA ATCGCGAAGT AGCGTTAGAC GACCTCGCGA TCACCGAACT CAAGTTCCCC AACCCAACCG ACCGGCAATC TCAAATCCTG GAAGAACTCC GCGCCAAGAT GGGCAAAGCG ACGAAGATCA TCAGCCTCGA TCGTCTCCAG GCCATGATGG CGACTGCCGA ACCTGAGTTC GACAAAGTCC AGGTCAAGAA CGATCCACCA AGAGTCATTT TCAGCGCGAA GCCCGCCATG CTCGTCACCA TTGATGGCGA GCCGCAACTC CGCCAGGTCA ACGACACCTA CCTGAAGCGC GTGATCAACA CCAACTCCGT CCTCATCTTC GAATTCGACA AGAAGAAGTA CTACCTGCGC GTAAAAGATT GGTGGCTCGA GTCCGAGTCG CTCGACGGAC CCTGGAAATA CGCCGAGAAG CTTCCCAAGG ACATGAAGAA GGCCGAAGAC GTCGCCGTCG AAAGAGCGAA GCAGGAGAAA CCCGAAGCGG AGGCTGAGAC GGAAGAATCG CTGAAAGATG CCGGCAAACA CGCCGAGATT CCCGACATTT ACATCGTCTA CAAACCGGCC GAGCTAGTCG AAACCCAGGG CGAGCCCGCA TTCAAGCCAA TCGCGACCAC GCAAATCGAA TACGTCGCCA ACACCAACGC CATGGTGCTC CGTTATGGCG GCGCGATTTA CGCCCTGCTC TCCGGACGCT GGTTCAAGAG CGCCAGCCTC ACCGGCCCGT GGGAGTACGT CGCTAAGGAC GCCATCCCGC AGGAGTTCGC CAAGATTCCC ACCGACAGTG AACGCGCCAG CGCGCTGGTT TCCCTGCCCG GCACACCGCA AGCGCAGGAA GCGCTGATCG CCAACTCGAT CCCGCAAACC GCGACCATCA CGCGCTCCGA AGCGAAACTC TCGATCGCCT ACGAAGGCGA TCCCGTCTTC GAGCCGATCA GCGGCACCAC GCTGCAATAC GCGCGCAACA CCGCCGCCGC CGTCATCCGC GCCGACAACC TTTATTACGC CGTCGAAGCC GGTGTTTGGT TCAAGGGATC CACGCCAAAC GGCCCGTGGG AAGTCACCGA CACCGTCCCC GCCGAGATCT ACAACATTCC GCCGAGTTCC CCGCTCTACT ACGTCACCTA CTCCAAGGTT TACGGCGGCA CACCGGAAGT CGTGTACGTG GGCTACACAC CCGGCTACTA CGGCACCGTG ATCTCCGCCG ACACCGGCAC CGTCGTCTAC GGCACCGGCT GGTACTACCC GCCCTACGTC GGCGGCTCGT GGTACGGATA CCCATACACC TACGGCGTCG GCGCGTCGTT CACGTGGGCC AGCGACAGCG GTTGGAGCAT TGGCTTCGGC TACGGCTATT ACTACTCGCC TTGGTATTAC CCGTGGTACG GCCCGCTCGG CTACTACGGA TACGGCTGGT ATCCCTACTA CGGTTGGGGC GCGTGGGGCG GCGCCGCCGT GGCTAACGTC TACGGACGCT GGGGCAACAC TGCTTACAGC CGTACCGGCG CCGCTTGGGC CAATCCTTAC ACCGGCAATT ACGGCGGAGC GACGCGCGGA CGCACGGTTA ACACCGCGAA CGGCCGCATT GCCGCCGGTG GTCGTGGCTA CAACACCAAC ATCTACACCG GAAACACCGT GGGATACCGC GGCGGTGCGG TTTATGACCC CAAGAGCGGC ATCGTCGCCG GTGGTGGCGC GGGATTTGCC GGGAATCGCT ACACCGGAAG CGGCACCGCG GGTCGTGGCG GCTTCGCCTA CAACACCAAC ACGAACACCG GAATCGCCGC GGGGAAAAAC AACATTTACG CGGGCAAAGA CGGCAACGTC TACCGCTACG ACCGTAACAA CGGCAGTTGG TCGCAAAACA CCGGCAACGG CTGGAACTCC GTCCAAAAGC CCGAGAGCCG CTCATCGCTG CAGAACCAGC AGAACGCGCG TTCGCAAGGA CAGCAACGTT CGCAGAATTT CGACTCGGCG CGCAGCTCAA GTAACGTGAA TCGCGGAAGC ACCATGCGGT CCGCACCGCG CGGAGGCGGT GGACGTCGCC GCTAG
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Protein sequence | MRRFILVFVV VSSSLLVAQS LPDAPSAVAQ KGGTAAPTPA KPKPAATTPH DNGWPRTVKL DEKTSITLYQ PQADKWDGNR LYVYSAVALN EAGVKTPRYG VVSFNARTEV DKINREVALD DLAITELKFP NPTDRQSQIL EELRAKMGKA TKIISLDRLQ AMMATAEPEF DKVQVKNDPP RVIFSAKPAM LVTIDGEPQL RQVNDTYLKR VINTNSVLIF EFDKKKYYLR VKDWWLESES LDGPWKYAEK LPKDMKKAED VAVERAKQEK PEAEAETEES LKDAGKHAEI PDIYIVYKPA ELVETQGEPA FKPIATTQIE YVANTNAMVL RYGGAIYALL SGRWFKSASL TGPWEYVAKD AIPQEFAKIP TDSERASALV SLPGTPQAQE ALIANSIPQT ATITRSEAKL SIAYEGDPVF EPISGTTLQY ARNTAAAVIR ADNLYYAVEA GVWFKGSTPN GPWEVTDTVP AEIYNIPPSS PLYYVTYSKV YGGTPEVVYV GYTPGYYGTV ISADTGTVVY GTGWYYPPYV GGSWYGYPYT YGVGASFTWA SDSGWSIGFG YGYYYSPWYY PWYGPLGYYG YGWYPYYGWG AWGGAAVANV YGRWGNTAYS RTGAAWANPY TGNYGGATRG RTVNTANGRI AAGGRGYNTN IYTGNTVGYR GGAVYDPKSG IVAGGGAGFA GNRYTGSGTA GRGGFAYNTN TNTGIAAGKN NIYAGKDGNV YRYDRNNGSW SQNTGNGWNS VQKPESRSSL QNQQNARSQG QQRSQNFDSA RSSSNVNRGS TMRSAPRGGG GRRR
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