Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3146 |
Symbol | |
ID | 4071216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3739937 |
End bp | 3740692 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637985166 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_592221 |
Protein GI | 94970173 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCAA TCATTACCAG TGGCGCAACC CCGCGACGCG AGCCTCGCCG CACTGTCGCA CTGCAAGTCC GCGTCTTCGG TCTCGATGCC GACGGCAAGC CGGTGAACTG CGAATGCTCT ACCGTGGACA TCAGCGCTCA CGGCGCGCGT CTCGCCGGAC CGCAACACTG GCGTACCGGT GAAATAATCG GTATCCGTCA CGGTTCCGAG AAGGGGCGCT TCCGGATCAT CTGGGTCGGC CCGAACGGAA CCCACGCCGA ATCGCAAATC GGATTGCAGG CCGTTGAGAT CAGCCGCCAC TTCTGGGGCG TGAACATGCC TCAGTTCCCG GGCACACCGA CCAGCACCGC AACGCCCTCG CGGATCGCAG GCATTACCGA CTCCACACCA AAGCCCGGTC GCCTCAATGC ATCCAGTACC GCAATGCCTT ATGCCGATAC GCGGCGCCAT TCGCGCCTGC GCTGCAACGG CGGGGCGAAA GTGATTCTCA GCAGCGTGAC GCATTGGGGA ACGGTCATCG ACCTCAGTGC CGGTGGTTGC TATATCGAAT GTCCTTCGAC CTATCCGGTC GGACAAGTTG TCTATCTGAA GCTTGGGGTA GACGATCTGA ACTTCGAGTC TGACGCGGTG ATTCGTGTCT CGCACCCGGG GATGGGTATG GGCTTTGAAT TCATGCGGCC GACCGCCATC CAACGCAAGA ATCTCGAAGA TTATTGTGCG GAGCTGGCGC GCGATCCCAA TCGCCTGCGC CGCTAG
|
Protein sequence | MAAIITSGAT PRREPRRTVA LQVRVFGLDA DGKPVNCECS TVDISAHGAR LAGPQHWRTG EIIGIRHGSE KGRFRIIWVG PNGTHAESQI GLQAVEISRH FWGVNMPQFP GTPTSTATPS RIAGITDSTP KPGRLNASST AMPYADTRRH SRLRCNGGAK VILSSVTHWG TVIDLSAGGC YIECPSTYPV GQVVYLKLGV DDLNFESDAV IRVSHPGMGM GFEFMRPTAI QRKNLEDYCA ELARDPNRLR R
|
| |