| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3071 |
|---|
| Symbol | |
|---|
| ID | 4072635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3649614 |
|---|
| End bp | 3651305 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637985090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592146 |
|---|
| Protein GI | 94970098 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAATCG CGCCAATCTC GCGACTCTCC CTCCTCGCCG ACTGCGGGCT GCTCCTCCTC
GCACTGCATC TCCCCATTCA CGCCCAGGAA CAAGCCAATA CGCCGAGAGA TCTCGTTTAC
AGCGGCCCAT GCAGACTCGG CGAAGCGCTG CCCGACACGC CGCGTTTTGA AGTGACCGGC
GTCGTCCTGA ATAACGTCAC CGGATCGCCG ATCGAAGGAG CTACCGTCAA GCTCAGTAGC
GAATGCATAT CCGACGAGCG CGCCCGCGCC ACCACAACCG ACGATGAAGG CAGGTTCACG
TTCACCCACG TCCGCGGAAT GGATGCCTAC ATCACGGCCA CCTTCGGCGA GGCTTTCCCG
GAGTGGAATG TTGGCCGCCG CGCCGACGAC CCGCTGAATC GCTACACGAT TGGCCCGCAC
ACCGGAGTGA TTACCCTGCG CCTTGCGCCA CCCGCTTACA TCACCGGTGT CGTGCGCGGC
GCAGACGGCG CTCCGCTCTC TCCGGCGATG GTAACTCTGC GTTGTCTCCG CCCGTGGGGC
GGCTGGCCGC AACACGAGGG CTGCAGTTCG TCCAACGTGA AACCCGACGG GTCGTATCGT
CTCGGCCCGC TGCTGCCCGG TCGTTATGCG GTCGTTATCG AGCCCGAGGT GGAATTCGGA
AAAGCTCCTG CCCCTGATGC CGATGGCGTA ACCCGCAGCT ATGTGCCGGT GCGCCAGCCT
GCGCTTACCG ACGACGAGAG TTGTCCCTAT TTCGATCTGA AGGAAGGCGA GCAGAAGCGG
CTCGACTTTA AGCTCAAGCG CGAAGTGTTG CACCACATCA CGGGCGCGAT CACCGGCAAG
TCTTGGACGA CCGTGAACGT CGTCGATCGC CTCGGCTCGC AATCTTATCC GGTGAAACTT
CTGGCGCAGT GTTGCGAGTT TGAGGCATGG GCGCCAAACG GAAGCTTCCG GATAGTCGGC
GACGGCAACC TCAAAGGCGA AGTCTCGATC AAGGTCCAGG ACGGTGATCT TTCCGGCGTG
GCGCTCCCCG CACACTCCGA CGACCGCCTC ACCATCCCCA TCGAAGTCTC GAGTACTGCT
CCGCCCAACG AGAACAGCGT TTGCCTGTTC GGCGAGACAG CTTGTGGCTT CTGGTACGCG
AACTTCCTCC GCTTCAACCC GCAAGGTGAG TTTGACGTAG TGCTTCAATC CAGCATGAAC
GGCAGCACGT CCGACGGAGT ACGACATGAG TCGGTCGAGG TTCCCTCCGG CAATTACGAG
CTGATCGTTT CGACCACAGG CAACGTCTAC GCCCAAACCA TCTCATCGGG CGCGACAAAT
TTGTTGCGCG AGCGTCTCGC CGTGAATCCG GGCGACATAC CCTCGCCCAT TCGCATCGTG
CTCGCCGAAG GCGAAATCGT CACCGGCACA ACTCTGCGCA ACGGCAAGCC GGCACGCGCG
TTCGTGTATG CCGTTCCCAG CGAGAACGAT GCTCGCGCTT TTCAGGGCGT CCCCAGCGAC
GAGCATGGGC AGTACAAGCT TGAGGGGCTC GCGCCTATCC AATACCACTT CTTCGCTTCC
GACGTGGAAC TGAACCTCGA CCTTCACGAT CCCGACGCAA TGCGCCCCTG GCTGCAATCC
TCCGAGACGC GCAGCCTTGC ATCCGGGAGT ACCACGTCGC TAGATCTACA CGTGTTGACT
CCTGCGAAGT AA
|
|---|
| Protein sequence | MQIAPISRLS LLADCGLLLL ALHLPIHAQE QANTPRDLVY SGPCRLGEAL PDTPRFEVTG
VVLNNVTGSP IEGATVKLSS ECISDERARA TTTDDEGRFT FTHVRGMDAY ITATFGEAFP
EWNVGRRADD PLNRYTIGPH TGVITLRLAP PAYITGVVRG ADGAPLSPAM VTLRCLRPWG
GWPQHEGCSS SNVKPDGSYR LGPLLPGRYA VVIEPEVEFG KAPAPDADGV TRSYVPVRQP
ALTDDESCPY FDLKEGEQKR LDFKLKREVL HHITGAITGK SWTTVNVVDR LGSQSYPVKL
LAQCCEFEAW APNGSFRIVG DGNLKGEVSI KVQDGDLSGV ALPAHSDDRL TIPIEVSSTA
PPNENSVCLF GETACGFWYA NFLRFNPQGE FDVVLQSSMN GSTSDGVRHE SVEVPSGNYE
LIVSTTGNVY AQTISSGATN LLRERLAVNP GDIPSPIRIV LAEGEIVTGT TLRNGKPARA
FVYAVPSEND ARAFQGVPSD EHGQYKLEGL APIQYHFFAS DVELNLDLHD PDAMRPWLQS
SETRSLASGS TTSLDLHVLT PAK
|
|---|
| |