Gene Acid345_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2783 
Symbol 
ID4072406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3297447 
End bp3297767 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content56% 
IMG OID637984801 
ProducttRNA pseudouridine synthase C 
Protein accessionYP_591858 
Protein GI94969810 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.153937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC ATAAGCTGGC AGAAGAATGC GCGGAAGCAG TCGACAAGAT TGAAGCCGAG 
ATGAAGCGCA TCGGGTATTG GCAGGAAGCG CCGCTTCGCG AGGAGCAGTA CGGATTCCAG
CAGGCGTTTG CCATGGACAC GATGACCTAC GCGCAGTGGC TGCAGTTCGC CTTTTTGCCC
AGGGTGCGCG AGGCCATCAC GAGCCAGCAG TTTCCAAAAA GCAGCGACGT GGGAACCCAG
GCAATTCGAG AGTTCGACGG TGACATAAAC GCCTCAGGAC TCGTAACACG GTTGTGCGAC
TTTGACGCGC TGTTCTCCTA A
 
Protein sequence
MNKHKLAEEC AEAVDKIEAE MKRIGYWQEA PLREEQYGFQ QAFAMDTMTY AQWLQFAFLP 
RVREAITSQQ FPKSSDVGTQ AIREFDGDIN ASGLVTRLCD FDALFS