Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2783 |
Symbol | |
ID | 4072406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3297447 |
End bp | 3297767 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637984801 |
Product | tRNA pseudouridine synthase C |
Protein accession | YP_591858 |
Protein GI | 94969810 |
COG category | [S] Function unknown |
COG ID | [COG3098] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.153937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAC ATAAGCTGGC AGAAGAATGC GCGGAAGCAG TCGACAAGAT TGAAGCCGAG ATGAAGCGCA TCGGGTATTG GCAGGAAGCG CCGCTTCGCG AGGAGCAGTA CGGATTCCAG CAGGCGTTTG CCATGGACAC GATGACCTAC GCGCAGTGGC TGCAGTTCGC CTTTTTGCCC AGGGTGCGCG AGGCCATCAC GAGCCAGCAG TTTCCAAAAA GCAGCGACGT GGGAACCCAG GCAATTCGAG AGTTCGACGG TGACATAAAC GCCTCAGGAC TCGTAACACG GTTGTGCGAC TTTGACGCGC TGTTCTCCTA A
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Protein sequence | MNKHKLAEEC AEAVDKIEAE MKRIGYWQEA PLREEQYGFQ QAFAMDTMTY AQWLQFAFLP RVREAITSQQ FPKSSDVGTQ AIREFDGDIN ASGLVTRLCD FDALFS
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