| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2764 |
|---|
| Symbol | |
|---|
| ID | 4072386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3272905 |
|---|
| End bp | 3274458 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637984781 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_591839 |
|---|
| Protein GI | 94969791 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGA AGCGAGCTTC CGGCATTCTT CTCCATCCAT CTTCCTTGCC GTCGCGTGGC
GGCATTGGCG ATTTCGGCCC CGCTGCTTAT GAATTCGTAA ATTGGCTGGC GGAGGGCAAG
CAAACGCTGT GGCAGATCCT GCCGCTCGGG CCTCCGGGGA TCGGGAACTC GCCGTATTCA
TCGACGTCGG CATTTGCGGG AAACATTGTG CTCATCAGCC TCGAGCGGCT GGCGGAGCGC
GGAATGCTCG ACAACGCTGC GCTGAAGAGC TTGCCGGAAA GCGATGGGAG CCGCGTTAAT
TTTGAGAACG TATTGAAGGT CAAACTCCCG CTGTTGCGAC AGGCGGCGGA GAGCTTTTTG
AAGAACGCTT ACGGAAATTC GCGCGAGCGG TTCAATCGCT TTTGCCGCGA CAACACCTGG
TGGCTCGACG ATTTCGTGCT CTTCGACGCT CTGCGCGAAC GTTACCAGGG AGCGAGCTGG
AATACGTGGC CGACCGAGAT TTCGCATTGC CAGCCGGAGG CAATTGCCAA GACGCGCAGC
GAACTGGCGC ACGAGTTGGA GGTCGCAAAG TTCCTGCAGT TTGCGTTCTT CGAGCAGTGG
GGCGCGCTGC GAAACTATTG TCATCAGCGG CGAATCCGGA TTGTGGGCGA CGTGGCGATA
TTCGTCAGCT ACGACAGCGC TGACGTCTGG ACGCACCGCG ACATCTTCCG TCTGCGCGAC
GTGGAACCCG AAGTCGTTGC CGGAGTGCCA CCGGATGCAT TCAGCGATAC CGGCCAGCGA
TGGGGGAATC CGCTATATGA CTGGAACCGC CTGCGCGAGC GCGGCTACGA CTGGTGGGTG
AGCCGCATGC GCTGGGCGCA CACCTGGTGC GACATCCTGC GCATCGATCA CTTCCGCGGC
TTTGAATCGT ATTGGGAGAT TCCGGCGGAC GAACCGACGG CGATCCACGG TAGCTGGGCG
AAAGGTCCCG CTGACGAGTT TTTCCACGTG ATCAACCGCG AACTCGGCGA GTTGCCATTC
ATTGCCGAAG ACCTGGGAAT GATCACTCCG GAAGTGCATC AATTGCGCGA GCGGCTGAAG
ATTCCCGGTA TGCGCGTGCT GCAGTTTGCG TTTGGCGATC GCGGCGCGCA CATGTACTTG
CCGCACCGCT ACGACACAAA CACCGTGGTC TATACCGGCA CCCACGACAA CGACACCACG
ATGGGTTGGT GGCAAGGTGA CGCCCAGCCG CATGAAAAGC GCGACGCCGC CGCAGCCTTT
GGCGCGAACG ACCAGAACGT GCATTGGGCG TTCATTCGCG CGGCGCAGAC ATCGCTGGCA
ACGCTGAGCG TGGTGCCGCT GCAGGACGTC TTCGGCCTTG ACAGTTCCGC GCGCATGAAT
ACGCCGAGCC TTTCCGACGG CAACTGGGGC TGGCGCTACA AGCGCGGGCT GCTTACGCAA
GATGCAGCGA AAACGCTGTC AGAACTAGCG GAGACGACGG ATCGCGACGA GTTGTTGTTA
TCAGGCGGAA ACCAGCAGGG CAACGGGGAA CGACCGGAAG ATTTCGCTGC ATAA
|
|---|
| Protein sequence | MFTKRASGIL LHPSSLPSRG GIGDFGPAAY EFVNWLAEGK QTLWQILPLG PPGIGNSPYS
STSAFAGNIV LISLERLAER GMLDNAALKS LPESDGSRVN FENVLKVKLP LLRQAAESFL
KNAYGNSRER FNRFCRDNTW WLDDFVLFDA LRERYQGASW NTWPTEISHC QPEAIAKTRS
ELAHELEVAK FLQFAFFEQW GALRNYCHQR RIRIVGDVAI FVSYDSADVW THRDIFRLRD
VEPEVVAGVP PDAFSDTGQR WGNPLYDWNR LRERGYDWWV SRMRWAHTWC DILRIDHFRG
FESYWEIPAD EPTAIHGSWA KGPADEFFHV INRELGELPF IAEDLGMITP EVHQLRERLK
IPGMRVLQFA FGDRGAHMYL PHRYDTNTVV YTGTHDNDTT MGWWQGDAQP HEKRDAAAAF
GANDQNVHWA FIRAAQTSLA TLSVVPLQDV FGLDSSARMN TPSLSDGNWG WRYKRGLLTQ
DAAKTLSELA ETTDRDELLL SGGNQQGNGE RPEDFAA
|
|---|
| |