| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2552 |
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| Symbol | |
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| ID | 4072196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3010272 |
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| End bp | 3011627 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637984569 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_591627 |
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| Protein GI | 94969579 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.603084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATC AACGACTGGA AATCGAAGAG AAACATACCG ACGCCGAAAC CACGCACAAC
ATTCGGCTCT GGATCATCGT TGCAGCAATT CTGCTCGTGA TCGTTTTTCT TGTCGGCTTT
GTGCCTCGAC ACGAGCGCAC CAAGCGGATC GGCGAGGACG CGAAGGAACG CCAGGGCCAG
CCTCCGACCG TGGATGTCAC CAAGGTACGG AGATCGGACG CCAAATCGCA CCTCAGTATT
CCCGGGACGA TCACGGCGGT AGTCGAAGCA CCCATCTACG CGCGGGCTTC CGGGTACATC
TCGAAGCGCA ATGTAGATTT TGGCGATCAC GTCCACGCAG GTGCATTGCT CGCAACTATT
GATGCGCCCG ACCTCGACCA GCAGGTGGAC CAGGCCCGCG CCACGTTGCT CCAAAGCGAA
TCAGTTCTTG GTCAACAACA AGCGCAGCTC AAACTTGCGA GCGTTACCTG GGACCGTTAC
AAAGTGCTGG TCCAACGCGG TGTCGCTTCC AAGCAAGAGG GCGACACGCA GGAAGCGACC
TACGAAGTTG CTATGGCAAA CGTGAAGGCT GCGGAAAATA GTGTCACGGC CAGTCGCGCC
AGCCTCGATC GTTTGCTGAA ACTGCAGAGC TACGAAAAAG TCACCGCGCC CTTTGAGGGT
ATCGTCACCG CACGCAACGT GGATGTGGGG ACCCTCATCT CCACGACAGG CGCGGGACAG
GGGAATGCGT CTGGCGCGGC GACCGGGCTT GCGCAGGGCG GAGAGATGTT CCGCGTTGCC
CAAATCAACC GTCTTCGCGT CTTCGTGAGT ATTCCTGAGT CTTACGCAGC CTTTGTACAG
ACCGGCCAGA ACGCAGACGT CACGGTGACC TCCGTGCCGA ACCAGAAGTT CGCCGGAAAG
GTTACGCGCA CCACGAACGC GGTTGATCCA GCCACTCGTA CGCTGCTCAC GGAAGTGCAA
ATTGATAACC GAGAAGGCAA GCTGCTGCCG GGCATGTACG GCACGATTAC TTTCGAGAGT
GTCCGCACCA TGCCGCCGCT CGTGATTCCG TCGGACGCGC TGATTTACCG ATCGCAAGGC
ACGATGGTCG CCACGGTACA GGACAATATT GTTCACCTCG TGCCGATCAA GGTAGGACGC
GACTTCGGCT CCCAGCTTGA AATCGTCGAA GGGCTGAACG AAGGCGATTT TGTCGCCATC
AATCCGAGCG ATGTCGCTCG CGACGGCGCC AAAGTGACGC CGCATGAACT CGCATCTCAG
AACAACGCCC GGCCGGGCGC TGCGCAACCA CCCAGTGGTC AGCAAAACAA CGGTCAAGGC
CAACAAGGCG CAGGGAAGAA GAACTCCGGC CAATGA
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| Protein sequence | MSNQRLEIEE KHTDAETTHN IRLWIIVAAI LLVIVFLVGF VPRHERTKRI GEDAKERQGQ
PPTVDVTKVR RSDAKSHLSI PGTITAVVEA PIYARASGYI SKRNVDFGDH VHAGALLATI
DAPDLDQQVD QARATLLQSE SVLGQQQAQL KLASVTWDRY KVLVQRGVAS KQEGDTQEAT
YEVAMANVKA AENSVTASRA SLDRLLKLQS YEKVTAPFEG IVTARNVDVG TLISTTGAGQ
GNASGAATGL AQGGEMFRVA QINRLRVFVS IPESYAAFVQ TGQNADVTVT SVPNQKFAGK
VTRTTNAVDP ATRTLLTEVQ IDNREGKLLP GMYGTITFES VRTMPPLVIP SDALIYRSQG
TMVATVQDNI VHLVPIKVGR DFGSQLEIVE GLNEGDFVAI NPSDVARDGA KVTPHELASQ
NNARPGAAQP PSGQQNNGQG QQGAGKKNSG Q
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