| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2474 |
|---|
| Symbol | |
|---|
| ID | 4072098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2925353 |
|---|
| End bp | 2929462 |
|---|
| Gene Length | 4110 bp |
|---|
| Protein Length | 1369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637984491 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_591549 |
|---|
| Protein GI | 94969501 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.291418 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CGAAACCGAC GACCCGCAAA CGTCGCAAGA TCCGCCAGGC GGTCTACGGC
TCGCTCGTCC TGCTTACGTT CGTCTGCACC GGTTGGTACC TCACCAGCGA CAGCTTCCGC
GAACTCATTC GTCACCGCAT CATCAATCAA CTGGAAGATG CCACCGGTGG CAAAGTCGAA
ATTGGCCGCA TCCAGTGGAA CCTTGCTCGT CTGCGCATCG GAATCGACAG CCTCACCATC
CACGGCCTCG AGCCCGCTGG TCAGGCGCCG CTGCTGCAGG TCCGCCGCAT TGACGCCAAT
ATTCGCATCG TCTCGTTCCT CCAGCGCCAA ATCAGTCTTA AGAACCTGAA CGTCTCGAAT
CCATCCGTAA ATCTCCTCGT TTATCCCGAC GGCAGCACCA ACCAACCCAC GCCGCGCACT
CGCAAGGCCG GGATTCCGAC CGGCCCCATG GATCCACTCT TTGACATCGC CGTTCGCAAC
CTCGTAGTCA CCAACGGCCT GCTGAAGGTC AACGAGCGCA GAACGCCGTT TGACCTCGCC
GCGAGCGATC TCACAATCCG GCTCGGCTAC CAAAGCAATC CGGAGTTCTA CAACGGCCGC
ATCGAGCTCG GAAAATTCGA CGCCCAATAC GACGACTTGC GCCCGTTCTC TCTCGGTGCA
GTTTTCGATT TCCGCCTCTA CCGTAACTCG ATCGAGATGC GCGCCGCTCA CATTATCTCG
GAGCGCTCCG AACTCGCGTT CGATGGCAAG CTCACGAACT TCGCAGAGCC ACGCGTCGAG
GGAAACTACA CCGCAAAGAT CGACCTGCGC CAGATCGCGG CCATCACTCG TGTCAAAGGC
GTGCAATCTG GCTCCGTGGA ATTGCGCGGC AAAGGCGCGT TCGACGCCCA GAGGTTCCTC
TCCAACGGCA ACGTGACGCT GCTCGATGTC GGCTGGAGCA ATCCTTCTGT CCACGTGATC
TCGGTTTCCG GTTCTTCGAA TTACTACGTA GACCGCGACA AACTCGCCTT CGACCAGGTA
GCCCTCAACG CGCTGGGTGG AAGTGTCGGC GGTGCTTTCA CCGTGCTGCA CTGGAACGCC
CCTCCTCGCG AACACGTTGA ATCGCCTTCC AGTCGTGCCA AAGGCGCGCA TGCTATTGAG
GCCGTCGAGC AAAATGCCGA CGGCAAGTTC GAGTTGCACA ACCTTCAACT CGAACGCATC
GCAGCCATGT TCCACAGCAC CTCTTTGCCA CTTTCTTCGC TGCACGCCGT CGGCTCCGCT
TCCGGAAAAG CCGAGTTCGC TTGGCAGGGA AGACCAATCG CTGCCGAACT CAAGCTCGCC
CTCGACGCCG TTCCTCCTGC CACCGCTGAT CCCCATCAGA TGCCTCTTGG AGCGCACTTC
CAGGGCACCT ACGCGGTCCG CGACAACTCC GTGCGCATCT CGCAAGCCGA CCTGCAATCT
CGCGGCACGC ACCTCAATGC CACCGGCTTT GCCAGTCCCC GAAACTTCGA TCTCGCTGTC
GGTCTCACCA CCACCAACAT GAATGAACTC GAGCCCCTCC TCATGAAGCT TGGCAACGAA
ATGCCGTTGC AGGTCGCTGG CGAGGGTTCG TTCCAGGGGA CGATCGAAGG CAATCCGTCA
CTGCCCAATA TCAACGGCCA TCTCCGCCTT ACTGATTTCG AAACCGTTAT CAAGCCGCCA
ACTGCTGCCA CCCACGAACC CGAGTTAGTG AAGGCGCTGC ACAAAAAAGG GAAGCCGGAG
ATCAAGCAGG GAACTACGCC CGCGCCTCTT CCGCAAACCA AGCCCGTCCG CTTCCATTGG
GATTCTTTTG ACGGATACGT CGCATACGGG CCGAGCGGTG CGTCCGTTCG TGGCGGAGTA
TTGCGCAGCG GCAGTGCGCG TTTTGAAGTC GCAGCCAGCA CCACGCTCCA GAACGGCGCC
TTCACGGATA CGTCCGTCTT TCACGGCAAC GCCCGGATTC GCGACGCCCG CGTCGAAGAT
GCGCAGGCTC TCCTTGGCTT CAACTATCCC GTCACGGGCA CGCTCAACCT CGAGATCCAG
ATGGAAGGCA CCCGCCTCGA TCCGCGCGGC ACCGGCGTGC TCACGATCAT TGACGGCACC
GCCTACGGTC AGCCGATGCA GTCGCTCTCC ACCGATCTCA CATTCAGCGG ACGCGAGGCC
AGGTTCTCAA ACATTCAAGC GACTTCCGAC TCCGCCAAGG CCGAGGGCTC CGGCTTGATC
AACGTCTCAA CCGAGGCCTT CCAGTTCGAT CTCCGTGGAA CCGGCATAGA CCTTCTACGG
TTCCCGGAGG TGCAAACGTC GAAGGTAAAA CTCACCGGCA TCGCCGAGTT CAACGCCAAG
GGCAGTGGCA CGCTGTCGGA GCCTCACATC GAAGGCCACG TGCGCGTCGG CAATGTCTCG
CTAGGCGGCA AGAAAGAAGG CGAACTCCTC ATTGACGCCA CTACCCACGG CGAGACTCTC
GACGTCACCA CCAATTCCCA CTTCGTCACC GCAACCGTCG AAGGGAAGGG CAGTATTCGC
ATGCGCGGCG ATTTGCCAAG CGACATCACC GTCGCATTCG GCAATGTTGA TCTCCAACCT
TTCCTCCAGG GCATTGCTCG CGGTCATTCG TCGATCGATG GCACGCTTCA CGTGACCGGA
CCCTTGCGTC ACCCGGTCGA CCTGGAAGCT CGGCTCGAAA TTCCGAAGTA CGAGTCCGTC
GTCGAAGGCA AGACGCTGCG CAACGTCGGC CCGCTGGTTG CGACGTACAA GGGCGGCATC
GCCAAGCTCG AAGCCTTCCG CATCACCGGC GAGAACACCG ACCTTACTTC TACAGGCACC
GTGCAACTTA CCGGCACCCA GCCCATCAAG GTCCGCGCCG ACGGCAAGGT CAACCTCACC
TTCCTCCAGA GTTTCAATCC CGATCTCGTC GCTTACGGAA ACACCAACAT CGCTGTCCGC
GTCGGCGGCA ACATCAAAGA TCCTTCCATC CGCGGACGCA TCACCATCGA GCACGCCGGA
GTATCGTACG TCGATCTTCC GAACGGTCTT AGCGATCTCA ACGGTAGCCT GGTGTTCAAC
GAAGATCGTC TCCAGGTCGA GAGCCTCACC GCACACACCG GCGGCGGCGA CCTCGCCATC
AGCGGATTTA TCGGGTACGG CCGCATCATC AGCTTTAATC TTGCTGCCAC CGGCAAAGAC
GTCCGCATCC GCTATCCGGA AGGCGTCAGC TCCAACGGCG ACGCCGACCT TCGCCTCGTT
GGCACAGTCA AGAACGCTAT GCTCTCCGGC GACGTCGTCA TCAACAAGTT CGGACTGAAT
CCACGCTTCG ATTTCGCGAG CTATTTCGCA ACTTCCAAGA ATCTTCCCGC GACACCCAAA
CCCGATTCGC CACTTAACAA CTTGCACTTC GATGTTCGCG TGATCTCCAC TCCCGAGTTG
CAAGTGCAGA CCTCGCTGGC GCGTATCACC GGGAACGTGG ATCTTCGTCT TCGTGGCACC
GCCTTGCGCC CTGTCCTTCT CGGACGCATC AGCATCGTCG AAGGCAACGT TACCTTCAAC
GGCACCAAAT ATCGCTTGGA TCGCGGCGAC ATCCTCTTCG CGAATCCGAC GAAGATCGAT
CCCGTTCTCG ATCTCGAGGC CTCAGCGCGC GTCAGCGACT ACGACATTTC CATCGGCCTG
CACGGCACCA CCGAGAAACT CAACACCAGT TATCGTTCCG ACCCACCGCT GCCCACCGCG
GATGTCTTCG CCCTCCTCGC CTTCGGACAC ACCACCCAGC CCTATATGGC TCCGGGCAGT
TCGCAGTTCA CGGAAACCGC ATCCAGCGCG GTTCTTGGCT CGGCCCTGAA TGCTGCCATT
AGCAGTCGCG TGCAGAAGCT CTTCGGCGCC AGTCGCATCA AGATTGATCC CGAAGTCGGC
GGAGCAGAGA ACAACCCTAA CGCGCGCATC ACCGTCGAAC AGCAAGTCTC AGGAAATATC
ACTCTGACGT ACATCACCAA CCTCACCCAA TCAGCCCAGC AGGTGATCCA ATTCGAGTAC
AACGTGAACC GGAATGTTTC GATCGTAGGC GTGCGCGACG AGTACGGTGT CGTAGGATTT
GAAGTGCAGG TGCGGCAGCG CAAACGTTAA
|
|---|
| Protein sequence | MTDAKPTTRK RRKIRQAVYG SLVLLTFVCT GWYLTSDSFR ELIRHRIINQ LEDATGGKVE
IGRIQWNLAR LRIGIDSLTI HGLEPAGQAP LLQVRRIDAN IRIVSFLQRQ ISLKNLNVSN
PSVNLLVYPD GSTNQPTPRT RKAGIPTGPM DPLFDIAVRN LVVTNGLLKV NERRTPFDLA
ASDLTIRLGY QSNPEFYNGR IELGKFDAQY DDLRPFSLGA VFDFRLYRNS IEMRAAHIIS
ERSELAFDGK LTNFAEPRVE GNYTAKIDLR QIAAITRVKG VQSGSVELRG KGAFDAQRFL
SNGNVTLLDV GWSNPSVHVI SVSGSSNYYV DRDKLAFDQV ALNALGGSVG GAFTVLHWNA
PPREHVESPS SRAKGAHAIE AVEQNADGKF ELHNLQLERI AAMFHSTSLP LSSLHAVGSA
SGKAEFAWQG RPIAAELKLA LDAVPPATAD PHQMPLGAHF QGTYAVRDNS VRISQADLQS
RGTHLNATGF ASPRNFDLAV GLTTTNMNEL EPLLMKLGNE MPLQVAGEGS FQGTIEGNPS
LPNINGHLRL TDFETVIKPP TAATHEPELV KALHKKGKPE IKQGTTPAPL PQTKPVRFHW
DSFDGYVAYG PSGASVRGGV LRSGSARFEV AASTTLQNGA FTDTSVFHGN ARIRDARVED
AQALLGFNYP VTGTLNLEIQ MEGTRLDPRG TGVLTIIDGT AYGQPMQSLS TDLTFSGREA
RFSNIQATSD SAKAEGSGLI NVSTEAFQFD LRGTGIDLLR FPEVQTSKVK LTGIAEFNAK
GSGTLSEPHI EGHVRVGNVS LGGKKEGELL IDATTHGETL DVTTNSHFVT ATVEGKGSIR
MRGDLPSDIT VAFGNVDLQP FLQGIARGHS SIDGTLHVTG PLRHPVDLEA RLEIPKYESV
VEGKTLRNVG PLVATYKGGI AKLEAFRITG ENTDLTSTGT VQLTGTQPIK VRADGKVNLT
FLQSFNPDLV AYGNTNIAVR VGGNIKDPSI RGRITIEHAG VSYVDLPNGL SDLNGSLVFN
EDRLQVESLT AHTGGGDLAI SGFIGYGRII SFNLAATGKD VRIRYPEGVS SNGDADLRLV
GTVKNAMLSG DVVINKFGLN PRFDFASYFA TSKNLPATPK PDSPLNNLHF DVRVISTPEL
QVQTSLARIT GNVDLRLRGT ALRPVLLGRI SIVEGNVTFN GTKYRLDRGD ILFANPTKID
PVLDLEASAR VSDYDISIGL HGTTEKLNTS YRSDPPLPTA DVFALLAFGH TTQPYMAPGS
SQFTETASSA VLGSALNAAI SSRVQKLFGA SRIKIDPEVG GAENNPNARI TVEQQVSGNI
TLTYITNLTQ SAQQVIQFEY NVNRNVSIVG VRDEYGVVGF EVQVRQRKR
|
|---|
| |