Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2438 |
Symbol | |
ID | 4072872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2879888 |
End bp | 2883643 |
Gene Length | 3756 bp |
Protein Length | 1251 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637984454 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_591513 |
Protein GI | 94969465 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4934] Predicted protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.374669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGATACAA GAAAATCGAT TTGGCGATTC ATAGGGCCCG CAATTCTCTG TCTGTCCGTA AACGCAATGG CGCAAGTAGC ATCGCGCGTC ACCGGCGATC TCAATAGTTC AGCGCGCGTA CAACTGAAGG GCACGGCATC CCCGCTGGTT GCGCGCAGCA CCGACAAAGG GCGCCTTCCC GGCGAACGCA ACCTGGGGCG GATGGTGCTT CTGCTCGCGC CTACCACGCA GCAAGACGCA GCCGCAAAAG CATTGGTAAA GGACCTGCAC GATTCATCCT CACCTAATTT TCATAAGTGG CTTACTCCCG CGGAATTCGG CAAGCGCTTC GGTGTATCGG AGAACGATGC TGCGGCGGTG CGCACCTGGC TGGAATCGAA TGGCCTGACG GTGCACGAAG TGGCCGACGG CCGGCGGTTC ATCGTCTTCA GCGGCAGCGT GTCGCAAGTG GAGAAGACGT TCGCAACCGA GATGCATTCC TATTCGCGCA ACGGCAAGGA GTTCATCGCA AACGCCAGCG AAATCAAAAT CCCCGCTGCG CTCGCGCCGG TTGTAAAGGG TGTGGTGCGT CTGCACAGCG ATCCGCCGAA GTCACAGGCC TACATGGGAA AGAAGGTGCA TTGGGACCCA ACCAGCGGCC AATGGGAAGG CGGCGATGGC AGCCACTACC TGGCGCCGGC GGATTTCGCG AAGATCTACA ACCTCGATCC GCTCTACAAG GCTGGGATTG ACGGCACCGG CCAGACCATC GCGATCGTCG GCCGCGGCAA CATTTTCCTA AGCGACGTGC AGAACTTCCG TACGCTCTTC AACCTTCCGG TGAACGATCC GGAGATCATC GTGAACGGCG ACAATCCGGG CGAGACCAGT GGCGACGTTC CTGAGGCCAC ACTCGATGTG ACCTGGTCCG GTGCCGTAGC GCCGAACGCG CACATCAAGT TCGTCGTCTC GCAGAGCAAC TTCTCGGATG GCGTGGATGT TTCGGCAGCC TACATCGTCG ACCACAACCT GGCGCCGGTC ATGAGCACCA GCTTCGGCTT GTGCGAGGCG TATTTCACGC CAGTGCAGAA TGCTTTTTAT AACGCGCTGT GGCAGCAAGC CGCGGCGCAG GGCATCACGT CTTTCGTGTC AGCGGGTGAC AATGGTGGCG CCGGTTGCGA TGAACCGGGC GGCGGCACGT ATGCGTTCAA CGGCTTGAAT GTCAGCGGTC TCGCTTCTAC TCCTTACAAC GTCGCGGTTG GTGGCACCCA GTTCGACGAC ACCGACGATC CGACTAAATA CTGGGCCTCA ACCAGCGATC CGACTACAGG TGCGTCGGCG CTCGGATACA TTCCGGAGAA GGTCTGGAAT GAAAGTTCGA ACGATCCGAA CAGCCCGGGA CTTTGGGCGG GAAGCGGCGG CGTTAGTTCA CTCTACAAAC AGCCCGATTG GCAGACGGTT TCGACCTCGA TTACCGGCGG GATGCGCGCG CTTCCTGATA TCTCTCTCAC GGCGGCGCAG CACGACGGCT ATCTCGTCTG TCTCTTCCAG AATTGCAGTT ACGGAGAATA CTTCTACGTC TTCGGCGGAA CGTCGGCGTC GAGTCCGGCA GCGGCCGGCA TCATGGCGCT GGTGAACCAG AAGATGGGCG GCCAGCCCCA GGGCATGGCG AATTACGTCT TCTACAAACT CGCGAGCACG CCGGGAGTGT TTCACGATAC AACGGTCGGC GATAACAAGG TGCCCGACGC GTCAGGCATG TACACCGTGG GCTACGACGC AGTATCGGGA TACGACCTTG CTACCGGGCT CGGCTCCTTC GATGCCAACG CCTTGGTAAA CAACTGGGCG GCAGCTTCGT CCGGTAACGC AGCGACCGTG ACACTCGCAG TCGCTCCGGG GCAGGCGAAG AACGTGGAAC ATGGAACGGC GATTCCCTTC ACCACGACCG TGAAGTGCAG TGGCACCGGA TGTGAAGCTC CAACCGGTGC CGTCACACTG CAGGCTACGA GCAGTTCGTC GTCCGTGGGC ATCGGCACTG GGGCGTTGAC GCCGTCGTCT ACCGGAAGCG TGGCGAATGT CACGTCGTCG GCGATTCCGG GCGGTTCCTA CACGGTCGCA GCACGATATG GTGGCGACGG CACCTACTAC GCTGCGGATT CCAACGGCGT GGGCTTCAGC GTAACTCCGG AAGCCAGCTA CAGCCTGGTG GGCTCCGTGG GCGCGGGCGT CTTGACGATT GCTCCCATCA CTGTGCAGTA CGGCGAGCCG ATCAACATGG GCGCCATCGT GGCCGGCAAT TCGGGTGCGG GCTATCCCAG CGGCAACCTG AGCATCAGGG TGGACGGCGC ACCCGCGACC ACGATTGCGT TCGATCCCGG CTACGGCTCG CAGACGCCGA GTGCACTGAA GTTGAATTAC GGCGAGAACT CCAACATCCT GATGCCGGGC ATCACGACGC AGAGCCAGTC AAGCACGGTG TCGTACCTGC CTACCTATTG GGACAACAGT AGCGACACCT CGCATCCACT GAATGAATTC CATGCCGGAC CGCACGTAGC ACAGGTCACG TATCCCGGCG ATGCCAGCTT CGCGGCGAAC ACATCGAATG CGTTCGCGTT CAACGTGAGC AAAGCCGATA CGTTCATCGC GGACTTCTTC CCGCTCGGAA CGCAGGTCGC AAATGTTCCC GTCCACCTGA TGGGCGAAGT CTTGTTCATC AGCCAGTGGT TCGGCGTTTA TACCGGAACC GTCTCAATCA CCGACGTAAC TTCAGGGACG CCGGTGGTGC TTGGCTCGGC GCCGATCAGC ATGCAATATG GCGGATCCTA TGACGTCACC GTCAAGGTCT CGACACCGGG CGACAACGAG TGCGGCAATC CCGGGGCGAA TGAGTGTCAC GTGCTCATCG TGAAGTTCAG CGGTGATCGC GACACCACAC CGTCGTCGGG CAAGTATTTC GTCCCCTTCC CGGCGATGAC CAGCAATGCG TACATCAGCC TGGGCTCCGA TGTTCCGAGC GCAATCGCTG GCGCGCCGGT GAACCTGATT GCGCAGGTAC AGAGCGACGT TCGCACTTAC ACGGCGACGG GCAGCGTGAC GTTCTACGAC GGCGCGACTG CGCTCGGCAC CGCGGCACTC GACGCCACGG GAACGGCGAC GTTGAACCTG ACGACTCTGG CACCGGGCGT ACATAGCAAC ATCACTGCGG TCTACAGCGG CGATGCAGTG CTGGCCAGCG TGAGTGGTGG ACCGTACTCG GTGGCGATTC AGGACTACAC CCTCACCGCG GATCCGGCCA CGCTGTCCAT CACCTCGGGT TCGAACGGCA CGGCACAGAT CAACATGCTG CCCATCGGTG GATCCACGCA GACGGTGCAG TTGTCGTGCG GATCGCTGCC CTCGAACATG AGCTGTACTT TTGCTCCCTC GTCGGTGACG CTTGACGGCA CCAACGTGGG AACGACCACG TTAACTATCA TCACCGGTCC ATCCAGCACC GCGGCAAATC ACGGCGCGTG GTGGGCCACC GCATCTACCA TCGCGCTCGG ACTGTTGTTT GTGCCGTTCA CGCGTCGGAA GCGGATGAAG TCGCTACTCG GCTTCACCGC GCTGATGGCC GTGATGGTTG CGGGCATCGG TTGCGGCTCC AATAGCTCGA CCGCGTTGCC TCCGTCGAAG AACGTAACGG CCGGAACCTA TACGGTGAGC CTCACCGCTT CAGGTGGAAC AGGGTCGGCG GCGAAGACGA TTCCGTTGGT GGTTACCGTG AAGTAG
|
Protein sequence | MDTRKSIWRF IGPAILCLSV NAMAQVASRV TGDLNSSARV QLKGTASPLV ARSTDKGRLP GERNLGRMVL LLAPTTQQDA AAKALVKDLH DSSSPNFHKW LTPAEFGKRF GVSENDAAAV RTWLESNGLT VHEVADGRRF IVFSGSVSQV EKTFATEMHS YSRNGKEFIA NASEIKIPAA LAPVVKGVVR LHSDPPKSQA YMGKKVHWDP TSGQWEGGDG SHYLAPADFA KIYNLDPLYK AGIDGTGQTI AIVGRGNIFL SDVQNFRTLF NLPVNDPEII VNGDNPGETS GDVPEATLDV TWSGAVAPNA HIKFVVSQSN FSDGVDVSAA YIVDHNLAPV MSTSFGLCEA YFTPVQNAFY NALWQQAAAQ GITSFVSAGD NGGAGCDEPG GGTYAFNGLN VSGLASTPYN VAVGGTQFDD TDDPTKYWAS TSDPTTGASA LGYIPEKVWN ESSNDPNSPG LWAGSGGVSS LYKQPDWQTV STSITGGMRA LPDISLTAAQ HDGYLVCLFQ NCSYGEYFYV FGGTSASSPA AAGIMALVNQ KMGGQPQGMA NYVFYKLAST PGVFHDTTVG DNKVPDASGM YTVGYDAVSG YDLATGLGSF DANALVNNWA AASSGNAATV TLAVAPGQAK NVEHGTAIPF TTTVKCSGTG CEAPTGAVTL QATSSSSSVG IGTGALTPSS TGSVANVTSS AIPGGSYTVA ARYGGDGTYY AADSNGVGFS VTPEASYSLV GSVGAGVLTI APITVQYGEP INMGAIVAGN SGAGYPSGNL SIRVDGAPAT TIAFDPGYGS QTPSALKLNY GENSNILMPG ITTQSQSSTV SYLPTYWDNS SDTSHPLNEF HAGPHVAQVT YPGDASFAAN TSNAFAFNVS KADTFIADFF PLGTQVANVP VHLMGEVLFI SQWFGVYTGT VSITDVTSGT PVVLGSAPIS MQYGGSYDVT VKVSTPGDNE CGNPGANECH VLIVKFSGDR DTTPSSGKYF VPFPAMTSNA YISLGSDVPS AIAGAPVNLI AQVQSDVRTY TATGSVTFYD GATALGTAAL DATGTATLNL TTLAPGVHSN ITAVYSGDAV LASVSGGPYS VAIQDYTLTA DPATLSITSG SNGTAQINML PIGGSTQTVQ LSCGSLPSNM SCTFAPSSVT LDGTNVGTTT LTIITGPSST AANHGAWWAT ASTIALGLLF VPFTRRKRMK SLLGFTALMA VMVAGIGCGS NSSTALPPSK NVTAGTYTVS LTASGGTGSA AKTIPLVVTV K
|
| |