Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2329 |
Symbol | |
ID | 4071483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2759738 |
End bp | 2762713 |
Gene Length | 2976 bp |
Protein Length | 991 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637984345 |
Product | Alpha-1,6-glucosidases, pullulanase-type |
Protein accession | YP_591404 |
Protein GI | 94969356 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0783894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0180008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCGCA GACTTTCTCT GCCCGTGCTC ATTTTGCTCT GCACGCTTGC GGGTTACGCG CAAGGACCAA CTCAAGCTCG CATTCACTAC TATCGTCCCG ACGCCCAGTT CGCTGGCTGG GGCCTGCATG TTTGGAACAA CACCACCGAC AACGTCACGT GGACGACTCC GCTGCAACCC GCTGGCAGCG ATAGCTATGG AATCTATTTC GACGTGGATT TGTTCGACGC AACCACGCCG CTGGGATTCA TCATCCACAA GGGCGATACC AAGGATCCCG GCCCCGATAT GTACATGGAT GTGACGCAAC CTGGGCGGAA TGCCTGGATC ATCTCGGGCG ACTCGACCAT TTACTACACG CAGCCGACGA AGTCGCAGTT GCTGTCGGCG AACTTCCATC GTCTGCAGGC GTACTGGATT GATCGCAACA CGATCGCCAT CCAGGCCGCG TATTTCCATA GCGGCGACAC GGTGAGGTTG CACTCGGACT TGAGCGCAGG GCTGGCGATT ACGGACACTG GATTGACCGG GGGCCAAAGC ACCCTGCTCA CTCCGGATCC GAGCGGACTC ACGCCGGCGC AGTTGGCGAC GTTCCCGCAA CTCAATGGCT ACGCCGCTTT CCATCTGCAG AACGCGAGGA GCTTCAACTA CGCAATGTAT TTGAAGGGGC AAGTCGCAGT ATCCGATGTG GATAGCGCCG GAAATCTAAC CTACGCGACA GGAGTACAAA CGCCCGGCGT GCTCGACGAT TTGTACTTTT ACAGCGGGAA ACTGGGGCCG TCGTTCCGCG GGACCGTGCC AACGGTCAGC GTGTGGGCTC CGACAGCGCA ATCCGTCGCT CTACAACTCT TCAACGCCGC AACCGACGCG ACTCCAACTC AGGTCGTGCC GATGCACGAG AGCAACGGCG TGTGGAGCGT GCAGGGCAAG CCACAGTGGA AGAACAAGTA CTACCTCTTC AATGTGAAGG TCTACACGCC GTTCACGTTC TCGGTTGTAG AGAATGTCGT CACGGATCCG TGGTCGCTGG GCCTGTCGCT GAACAGCACG AAGAGCCAGA TCATCGACCT CGATGACGCG TCCAACAAGC CATTGGGATG GGACCTGCTT CCCTCTCCGC CGCTGGCGAG TTGGAACGAC TTGAGCATCT ATGAACTGCA CATCCGCGAC TTCAGCGCGA CGGACAGCAC GATTCCAGCG GTGCAGCGAG GAACCTATCT GGCGTTCACC GACCAAACGT CGAATGGCAT GAAGCACCTG CGCAGCCTAT CGCAGTCGGG ATTGAGAGCA GTCCATCTGC TGCCGAATTT CGACATTGCC AGTGTGAATG AAGACAAGAC TACCTGGAAG ACGACGGGAG ATCTCAGCGT CTATCCGCCA GACTCCGACC AGCAGCAGGC GGCGGTGGCA GCCATCCAGG GGCAGGACGG CTTCAACTGG GGCTACGATC CTCTGCACTA TCTCACGCCA GAGGGCAGCT ACGCAGTGAA TGCCGCCAGT CGCACGAAGG AATATCGTGC GATGGTCGAG TCGCTGCATG CAAACGGGCT GCGCGTGATT CAGGACGTGG TCTTCAATCA CACCAGCAGC TTCGGACAAA ATCCAAACTC CGTCCTCGAT GAGGTTGTGC CCGATTACTA CTATCGTCTC GACGCCAACG GCGCGAACTA CTTCGCAAGC TGCTGCGCCG ACACGGCGAC CGAGCATCGC ATGATGGAAA AGCTGATGAT CGACGCGGTG ACCACCTTCG CCAAGGAATA CAAGGTGGAT GGCTTCCGCT TCGACATCAT GTCCTTCCAT TTGCTGTCGA ACATCCAGCA CGTACGGCAG GCGCTTGACC AGCTCACTCT ACGGAACGAT GGCGTAGATG GCCGCAAGGT TTACCTGTAC GGTGAGGGTT GGAACTTCGG CGAAACCGGC AACAACGCGC TCGGCAAGAA CGCCATGCAG AGCAATCTGT ATGGCACCGG CATTGGATCG TTCAACGACC GCACGCGCGA TGGCGTGCGT GGTGGTGGAC CATTCAACGA TGTCCGCGAG CAAGGCTTCG CTACCGGCTT ATTCACCGAC CCGAACACCA CGTTCTCCAT CGGCGACAGC GACACACAGA AAGCAAAGCT GCTGCAGGAA AGCGATTGGA TCCGCATCGG CCTGACCGGA AACCTGCGCG ATTACAGCTT CACGGATAGC AATGGCAACA CCGTGACCGG CGGCAGCGTG GACTACAACG GACAGCACGC AGGCTACACC GCGCAGCCGA TCGAAGACAT CAGCTACGCA TCCGCGCACG ACAATCAAAC CATCTTCGAT GCGGTGCAAT TGAAGTCGAA CATCACCGAC TCAATTGCCG ACCGCACCCG TCGCCAGAAC CTGGCAAACA GTCTTATCCT GCTCGGTCAG GGTATTCCCT TCTTCCACGC AGGCGACGAC ATCCTGCGTT CGAAGTCGGG TGACAACAAC AGCTACGACT CCGGCGACTG GTTCAACAAG ATCGACTGGA CCCTGCAAAC CGACAACTGG GGCGTGGGCC TGCCGATCGC GAGCCAGAAC AGCTTCCAAT GGAGCGACCT GCAACCACTA CTCGCCGACC CAGCACTGAT GCCGCAACCG GCGAACATCC AGCGCGCATA CGACCACTTC TGCGAGATGT TGCGCGTGCG CTACAGCTCA CCGCTGTTCC GCATGAGTAC CGAGCCGCAA ATCCAAGCGA ACTTGCGGTT CCTGAATGTC GGTCCGAACC AGATCCCGGG CGTAATTGCC GTGGTGCTGG GAACGGGACG TCAGCAGATC GTGGTGGTGT TCAACGGCAG TAATGCGTCG CAGACGATCA GCGATGCGTC GCTGGCGAAT TTGCGTCTTC AACTCCATCC GGTGCTGCAA CACTCCACGG ACCCGGTCGT GAAGCAGTCC ACCTACAACA GCAACGGGAG CGTAACGGTG CCGGCCCTGA CGACGGCGGT GTTCACGCCG CGTTGA
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Protein sequence | MLRRLSLPVL ILLCTLAGYA QGPTQARIHY YRPDAQFAGW GLHVWNNTTD NVTWTTPLQP AGSDSYGIYF DVDLFDATTP LGFIIHKGDT KDPGPDMYMD VTQPGRNAWI ISGDSTIYYT QPTKSQLLSA NFHRLQAYWI DRNTIAIQAA YFHSGDTVRL HSDLSAGLAI TDTGLTGGQS TLLTPDPSGL TPAQLATFPQ LNGYAAFHLQ NARSFNYAMY LKGQVAVSDV DSAGNLTYAT GVQTPGVLDD LYFYSGKLGP SFRGTVPTVS VWAPTAQSVA LQLFNAATDA TPTQVVPMHE SNGVWSVQGK PQWKNKYYLF NVKVYTPFTF SVVENVVTDP WSLGLSLNST KSQIIDLDDA SNKPLGWDLL PSPPLASWND LSIYELHIRD FSATDSTIPA VQRGTYLAFT DQTSNGMKHL RSLSQSGLRA VHLLPNFDIA SVNEDKTTWK TTGDLSVYPP DSDQQQAAVA AIQGQDGFNW GYDPLHYLTP EGSYAVNAAS RTKEYRAMVE SLHANGLRVI QDVVFNHTSS FGQNPNSVLD EVVPDYYYRL DANGANYFAS CCADTATEHR MMEKLMIDAV TTFAKEYKVD GFRFDIMSFH LLSNIQHVRQ ALDQLTLRND GVDGRKVYLY GEGWNFGETG NNALGKNAMQ SNLYGTGIGS FNDRTRDGVR GGGPFNDVRE QGFATGLFTD PNTTFSIGDS DTQKAKLLQE SDWIRIGLTG NLRDYSFTDS NGNTVTGGSV DYNGQHAGYT AQPIEDISYA SAHDNQTIFD AVQLKSNITD SIADRTRRQN LANSLILLGQ GIPFFHAGDD ILRSKSGDNN SYDSGDWFNK IDWTLQTDNW GVGLPIASQN SFQWSDLQPL LADPALMPQP ANIQRAYDHF CEMLRVRYSS PLFRMSTEPQ IQANLRFLNV GPNQIPGVIA VVLGTGRQQI VVVFNGSNAS QTISDASLAN LRLQLHPVLQ HSTDPVVKQS TYNSNGSVTV PALTTAVFTP R
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