| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2270 |
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| Symbol | mnmA |
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| ID | 4073264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2689946 |
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| End bp | 2691058 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637984286 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_591345 |
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| Protein GI | 94969297 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.291913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAAA GCGAGACAAT CGCGGTAGCC ATGTCGGGCG GTGTGGACTC TTCCACCGTC
GCGGCCATGC TGCGCGCTGA GGGCTACAAC CTGGTCGGCT TGACCATGCA GCTCTGGAAC
CAGCGCCGCC TCGCCCACCA CGAGGGCTTT GGAGAGCCCG GCGTGGGCCG CTGCTGCTCG
CTGGACGACG TCTACGACGC CCGCCGTGTC GCCGAGACCC TTGCCATCCC GTACTACGTG
GTGAATCAGG AAGACCGCTT CGAGCGCGAC GTGGTGAAGC CGTTCGTGGA GGACTACCTC
TCCGGCCGCA CCCCGATCCC GTGCAGCCTC TGCAATAACC ATCTCAAGTT CGACCAGCTT
CTGCGCACCG CGCAGCAGAT CGGCGCCGAG AAGATCGCCA CCGGCCACTA TGCACGCAAC
GATTTCAACG CGCAGACCGG ACGCTGGGAA CTGAAGCGCC CCGCCGACCG CGCCAAGGAC
CAGACCTACT TCCTCTTCGG CCTGACCCAG GAGCAGCTCA GCCGCACCCT GTTTCCGCTC
GGCCACAAGA CCAAGCCCGA GGTCCGCGAG GACGCGAAGA ACCACGGCCT CAAGCTCTTC
GAGAAGCCTG ACTCGCAGGA GATCTGCTTC ATCCCCAACG GCGACTACAA GAAGTTCCTC
GACGCCTATC TCGAGGAGCA GGGTGAGTCG TTACCCGATA CATCGGGCGA GCTAGTCACC
AGCAGCGGGG AAGTCGTCGG CCACCACACG GGCATCCACA ACTTCACGGT CGGCCAGCGC
AAGGGCCTCG GCGTTGCGAC GGGCAGCCCG CTTTACGTGA TCGAGCTGCG TGGCGACAAG
CGTCAGGTAG TCGTCGGCAA CAACGACGAG CTCCTCACGC GCAACCTGCG CGCCAAGCGC
ATGAATTGGA TCGCCGTAAG CGATCTCGCG CAGCCCATGC GCGTCCACGC GAAAATCCGC
CACAAGCACG AGCCCGCCTG GGCCACAATT GAGAAGACCG GCGACGACGA AGTTCTGGTC
ACGTTCGACG ACCCGCAGCG CGCAGTTACG CCCGGGCAGG CCGTGGTGTT GTACGACGGC
GATGTGGTCG TGGGCGGGGG ATGGATCTGC TGA
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| Protein sequence | MNKSETIAVA MSGGVDSSTV AAMLRAEGYN LVGLTMQLWN QRRLAHHEGF GEPGVGRCCS
LDDVYDARRV AETLAIPYYV VNQEDRFERD VVKPFVEDYL SGRTPIPCSL CNNHLKFDQL
LRTAQQIGAE KIATGHYARN DFNAQTGRWE LKRPADRAKD QTYFLFGLTQ EQLSRTLFPL
GHKTKPEVRE DAKNHGLKLF EKPDSQEICF IPNGDYKKFL DAYLEEQGES LPDTSGELVT
SSGEVVGHHT GIHNFTVGQR KGLGVATGSP LYVIELRGDK RQVVVGNNDE LLTRNLRAKR
MNWIAVSDLA QPMRVHAKIR HKHEPAWATI EKTGDDEVLV TFDDPQRAVT PGQAVVLYDG
DVVVGGGWIC
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