Gene Acid345_2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2259 
Symbol 
ID4073253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2680036 
End bp2680590 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content58% 
IMG OID637984275 
Productcolicin V production protein 
Protein accessionYP_591334 
Protein GI94969286 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00673398 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.784341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCC TTGACTGGGT CTTACTCCTA CTGATTTTGC TTTCTACGCT GCTTGCCGCA 
GCCCAGGGTT TCATTCTCGA AATCTTCGGC TTGGCGGGAG CGCTGGTCGG GTACGTTTTA
GCGGCATGGG AATACCGGCG GCTAACGCCG CTGTTTGCGA ATTACGTCAG TTCGCCATGG
GTGGCTGACA TCGCAGCTTT TTTGACAATT TTTCTGTGCG TTGTGCTCCT GGCAGGAGCG
CTGGCACGCA TTGTGCGCTG GGCCGTCTCG GGCGTGGGAT TGAAGTGGTT CGATCGCATC
CTGGGCGGGG CCTTCGGCAT GGTGCGTGGC CTGGCGGTAG CAGCGGTGAT CGTGATGGCA
TTCGCGGCAT TCGCGCCCAC CAGCCCTGCC TTGAAGCAAT CGGCATTTGC ACCCTACTTT
TTGGTGCTCA GCCGGACAGC TAGTTGGATT GCGCCTCCGG ACCTTAGAAA CAAGTTTCGT
GAAGGCGTGT TGATATTGCG GCAGGCGGGA GAGAAGGCAC CTCCAGTGCT CCCACCGCCG
AAACCATCGA AGTGA
 
Protein sequence
MNGLDWVLLL LILLSTLLAA AQGFILEIFG LAGALVGYVL AAWEYRRLTP LFANYVSSPW 
VADIAAFLTI FLCVVLLAGA LARIVRWAVS GVGLKWFDRI LGGAFGMVRG LAVAAVIVMA
FAAFAPTSPA LKQSAFAPYF LVLSRTASWI APPDLRNKFR EGVLILRQAG EKAPPVLPPP
KPSK