| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2168 |
|---|
| Symbol | |
|---|
| ID | 4073110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2587586 |
|---|
| End bp | 2588464 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637984184 |
|---|
| Product | bile acid--sodium symporter |
|---|
| Protein accession | YP_591243 |
|---|
| Protein GI | 94969195 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGGA CTCCGAACAG TGGCCGCCGA CCTATGCGCT ACCTCGTACT CATCGCGCTG
TTCTTCCTCA TGGTTTCCGT AGGCCTCAGC CTTCAGCCAT CTGAGCTGAT TACGCGTTGG
AAGCGCCCCA CCATTTCGGG TTGGATCGCG TTGACGCTGG TGACCTTCGT CGTTCCGCCT
GCCATCGCGC TGATCCTTGC CTGGATCTTT CGGCTGGACT ACGGTGAAAC CGTGGGTCTT
TTTCTGCTCG GAGTCTCTCC GGGAGCGCCG CTCATGACGC GTAACCTGGG GAAGAGCGGG
TACGATATAC ATCTCGCTGC GAGCTATCAG ATATGGGCAG CGCTCATGAT TCCCATCATG
CTTCCGCTAC TCGTGGCGGC AGCTGCGCGG TTCGGTGGCC GAGCGCTCTG GATTTCGCCG
CTGGTTCTGC TCTGGCAGAT CGTTCTGAAG CAGTTGCTTC CTCTCGGCCT GGGAATGCTC
GTCGCATGGT TCTTTCCGGC ATTCGCAGAA CGCAATCGTC CCCTCGCAGG CCGAATCGGA
AATATCCTCT TCATCCTCGC GCTGGTCCTG ATTCTTTATG CGCTGGGGGC CGAGCTCAAG
CACCTCACGC TCTTCCTTCC GCTTGCCGCG ATCCTGCTGG CAGTGAGCTC GGTCGCAATC
GTCCTGGTCG TCGACATTCG CGATGAAGCG ATGCGCAAGA CGTTCGCGAT CTGCAACACC
AACCGCAACG CAGGATTAGC TCTGCTTCTT TCGGCGCAAT ACGTCGGAGC GCGAGATTCC
GCACCGACGT TGGTCTACTA CGCCCTGTTC GCGCCAGTCG TGATGCTGAT TTATTCTCGG
ATCGTTTCGA AGCCAACGGA AACATCAGCA ATCGCATAA
|
|---|
| Protein sequence | MLRTPNSGRR PMRYLVLIAL FFLMVSVGLS LQPSELITRW KRPTISGWIA LTLVTFVVPP
AIALILAWIF RLDYGETVGL FLLGVSPGAP LMTRNLGKSG YDIHLAASYQ IWAALMIPIM
LPLLVAAAAR FGGRALWISP LVLLWQIVLK QLLPLGLGML VAWFFPAFAE RNRPLAGRIG
NILFILALVL ILYALGAELK HLTLFLPLAA ILLAVSSVAI VLVVDIRDEA MRKTFAICNT
NRNAGLALLL SAQYVGARDS APTLVYYALF APVVMLIYSR IVSKPTETSA IA
|
|---|
| |