| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2005 |
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| Symbol | |
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| ID | 4070911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2404119 |
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| End bp | 2405408 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637984019 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_591080 |
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| Protein GI | 94969032 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.436695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC GATACATGTC GGGTTTCGGC AACGAGTTCG CGACCGAAGC TGAACCGGGT
GCGCTGCCAA AGGGGCAGAA CTCGCCGCAA AAGGCGCCGC TCGGGTTGTA CACCGAGCAA
TTGAGTGGAA CGCCGTTCAC AGCGCCACGA TTGGCGAACC GCCGCACGTG GGCGTATCGC
ATCCGCCCTT CGGTGATGCA CAAGCCCTAC GAGGCTGCCG AGCAGAAGCT GCTACGCAGC
ACACCGTTCG ATGAAGCTCC CACGCCGCCG AACCAAATGC GCTGGGATCC TCCGCCTATT
CCGACGGAAC CAACGGACTT TGTAGACGGC CTCATCACGA TCGCGGGCAA TGGCGATTCC
ACCATGCACA GCGGCGTCGC GATTCATCTG TACGTCGCGA ACAAGAGCAT GAACGACCGC
TTCTTCTACG ACGCCGACGG CGAATTGCTC ATCGTGCCGC AGATGGGGAG GCTCATCTTC
CACACGGAAC TCGGGCGAAT TGAAGCTGCG CCTGGAGAGA TCGTTGTTAT CCAGCGCGGT
ATCAAGTTCC GCGTTGAATT ATTGGAGAAG CAGGCGCGGG GCTACATTTG CGAGAACTAT
GGGGCAATGT TCCGCCTGCC GGACCTCGGT CCGATCGGCG CCAATGGCTT GGCGAATACG
CGCGATTTCC TGACGCCCGT TGCTTCGTAC GAAGATCGCG AAGGCAGCTT CCGCGTGACC
TCCAAGTTTT GCGGCAAGCT GTGGGAAGGG GAGTACAACC ACTCGCCTCT CAACGTCGTC
GCGTGGCACG GGAATTACGC ACCATACAAG TACGATTTGG CAAACTTCAA TTGCATTAAC
TCCGTCACGT TCGATCATCC AGATCCATCG ATTTACACCG TGCTCACGGC GCCCTCGGAG
ATTCCGGGCA CAGCAAACTG CGACTTCGTG ATCTTCCCGC CACGCTGGAT GGTCGCCGAG
CACACTTTCC GGCCGCCATG GTTCCATCGC AACTTTATGA ACGAGTTCAT GGGCCTGATC
AAGGGCGAGT ACGACGCGAA GGCGGAGGGC TTTGTCCCCG GTGGCGCCAG CCTGCACAAC
TGCATGAGTG GCCACGGGCC TGATGCAGCG ACCTACGAGA AGGCGAGCCA CGCGGAGTTG
AAGCCGCAGT ATCTCGGCGA CACGCTAGCT TTCATGTTCG AAACGCGTTT TGTTTGCCGG
CCAACGAAAT ATGCGCTCGA AACAGCACAA CTGCAGCACG AGTACTACAC GTGCTGGCAG
GACCTAAAAA AACACTTTCG AAAACCCTAG
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| Protein sequence | MNDRYMSGFG NEFATEAEPG ALPKGQNSPQ KAPLGLYTEQ LSGTPFTAPR LANRRTWAYR
IRPSVMHKPY EAAEQKLLRS TPFDEAPTPP NQMRWDPPPI PTEPTDFVDG LITIAGNGDS
TMHSGVAIHL YVANKSMNDR FFYDADGELL IVPQMGRLIF HTELGRIEAA PGEIVVIQRG
IKFRVELLEK QARGYICENY GAMFRLPDLG PIGANGLANT RDFLTPVASY EDREGSFRVT
SKFCGKLWEG EYNHSPLNVV AWHGNYAPYK YDLANFNCIN SVTFDHPDPS IYTVLTAPSE
IPGTANCDFV IFPPRWMVAE HTFRPPWFHR NFMNEFMGLI KGEYDAKAEG FVPGGASLHN
CMSGHGPDAA TYEKASHAEL KPQYLGDTLA FMFETRFVCR PTKYALETAQ LQHEYYTCWQ
DLKKHFRKP
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