| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1976 |
|---|
| Symbol | |
|---|
| ID | 4069362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2367766 |
|---|
| End bp | 2369163 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637983989 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_591051 |
|---|
| Protein GI | 94969003 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.019973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTCA CCATCACCAA TGAGCGTACA CCGGCGACCG ACCTGGGATA CCTGCTGCAC
AAGAGCCCGG AGCGGCTCCA TTCGTTCTCG CTCGCCTATG GTAAGGCCCA CATTTTTTAC
CCCGAAGCGA CGCCGGAACG CTGCACCGTC GCGCTGCTGC TGGAGATTGA CCCCATCGGC
CTGGTGCGCA ATCGCCGCGG CCCCAGCGGA GATAATCATT CGCTCGAACA CTACGTCAAT
GACCGTCCCT ACGTCGCGTC GTCGTTCCTG AGCGTTGCCC TTGCGCGCGT GCTCGGCACC
GCCATGGCGG GCAAGAGTAA ACACCGCGCC GGCCTTGTGG ACGAGCCGCT TCCACTCACC
GCCAAGCTCG CCGTCATCTT CAGCCGTGGC GGCGAAGAGG CCATCCGCAA ACTGTTTGCG
CCGCTCGGTT ACGAAGTGAA AGCCGAGCGC CATCCGCTGG ATGAGAATTT CCCTGAGTGG
GGACAAGGCC CGTACTACGC GCTCGAGTTG CGCAAGGAAG TCACTGTCCG CGAACTACTG
AACCATCTCT ACGTGCTGAT TCCAGTACTC GATCCCGACA AGCACTACTG GGTTGGTGAC
GACGAAGTCG ACAAGCTCCT GCGCAAGGGT GAAGGCTGGC TCAAAACTCA TCCCGAGCGC
GATTACATCG TGCGCCGCTA CCTCAAGCGC CGCGGACGCC TTACCCGCAT GGCGCTCGCT
CGGCTCGTGG ACGAAACGCC CGATCCCGAT GCCGAGCTCG AAAAGAAGAC GCAGCAGGAA
GAAGAGATCG AAAAACCACT GAAGCTGCAC GAACAGCGCC TAAACGCGGT CGCCGAAAAG
TTGAAGGAGG CCGGCGCGCA GCGCGTGGTC GATCTCGGCT GCGGCGAAGG GAAGCTGCTT
CGAGCGCTCT TGAAAGAGAA GCAGTTCAAA GAAATTTTCG GAATGGATGT GTCGTACCGC
AGCCTGGAAA TCGCCGCCGA TCGCTTGAAA CTCGAAACTA TGCCCCCGAC ACAGAAGAAG
CGCATTCAAC TCGTGCAGGG CTCGCTCATG TATCGCGATA AGCGTATCGC CGGCTTCGAT
GGCGCTACTG TTGTAGAAGT CATCGAGCAC CTCGATGAAC CGCGCCTCGC TGCGTTCGAG
CGGGTGCTCT TCGATTTCGC CAAGCCAAGT ACGGTCGTCA TTACCACCCC CAACTCGGAA
TACAACGTGA AGTTCGAGAC CCTGCCCGCC GGACAGATGC GCCACAAAGA CCACCGTTTC
GAGTGGACGC GCGCGCAGTT CCAGGACTGG GCGACCGCGC TCGCCGCTCG TTACGGCTAT
ACCGTGAGTT TCTTCCCGAT CGGAGACGAG GACCAGGTAG TCGGTGCGCC AAGCCAGATG
GGAGTCTTCC AGCGATGA
|
|---|
| Protein sequence | MLLTITNERT PATDLGYLLH KSPERLHSFS LAYGKAHIFY PEATPERCTV ALLLEIDPIG
LVRNRRGPSG DNHSLEHYVN DRPYVASSFL SVALARVLGT AMAGKSKHRA GLVDEPLPLT
AKLAVIFSRG GEEAIRKLFA PLGYEVKAER HPLDENFPEW GQGPYYALEL RKEVTVRELL
NHLYVLIPVL DPDKHYWVGD DEVDKLLRKG EGWLKTHPER DYIVRRYLKR RGRLTRMALA
RLVDETPDPD AELEKKTQQE EEIEKPLKLH EQRLNAVAEK LKEAGAQRVV DLGCGEGKLL
RALLKEKQFK EIFGMDVSYR SLEIAADRLK LETMPPTQKK RIQLVQGSLM YRDKRIAGFD
GATVVEVIEH LDEPRLAAFE RVLFDFAKPS TVVITTPNSE YNVKFETLPA GQMRHKDHRF
EWTRAQFQDW ATALAARYGY TVSFFPIGDE DQVVGAPSQM GVFQR
|
|---|
| |