Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1918 |
Symbol | hppA |
ID | 4071028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2304378 |
End bp | 2306879 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983929 |
Product | membrane-bound proton-translocating pyrophosphatase |
Protein accession | YP_590993 |
Protein GI | 94968945 |
COG category | [C] Energy production and conversion |
COG ID | [COG3808] Inorganic pyrophosphatase |
TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTATGT GGCACGCCTC TGTGCGGCGT TTGTCCAAAT CTGTGCTTTT TATAAATCGG TCCTTTATAT CCCTGGCCAT CTTTTTAGGC GTGCTGGCAT TCTCCAGTAC TGCTGCCTTC GGGCAGTCCG AAGCCGGCGG CGAAGCAGCG TTGAAGCTTC CCGATCTGTC CTCCGTCAGT TTTATGGGTG TGGACGGCCA CAAGCTTCTT CTCATCGGCC TCGTCTTTTG CGCTCTCGGT CTGGCCTTCG GCCTCGCCAT TTACATGACG CTCAAGAACC TGCCGGTGCA TCGCTCGATG CTCGAAATCT CTGAGCTGAT TTACGAGACT TGCAAGACCT ATCTAACGAC GCAAGGCAAG TTCATCCTCA TCCTCTGGGC CTTCATCGCC GTGGTCATCG CCATGTACTT CGGATGGCTG GCGCCCGTTC CTAATAAGCC GATCGCAGTG ACCCTTCCCG TCATCCTTGC TTTCAGCCTG GTTGGGATTG CCGGCAGCTA TGGCGTGGCG TGGTTCGGCA TTCGCGTCAA CACTTTTGCG AACTCGCGGA CAGCCTTTGC CGGCCTTCGC GGCAAGCCGT ACTCGATCTA CGAGATCCCG CTGCGCGCGG GTATGAGCAT TGGCATGATG CTGATCAGCG TCGAATTGCT GATCATGCTC TGCATCCTTC TCTTCGTCCC CGCCGACTAC GCTGGCCCTT GCTTTATCGG CTTCGCGATC GGTGAATCGC TGGGCGCAGC CGCCCTGCGT ATCGCCGGCG GCATCTTCAC CAAGATCGCC GACATCGGTT CTGACTTAAT GAAGATCGTC TTCAAGATTA AGGAAGACGA TGCCCGCAAC CCCGGCGTTA TCGCCGACTG CACCGGCGAC AACGCCGGCG ACTCGGTTGG CCCATCGGCC GACGGCTTCG AAACTTACGG CGTCACTGGC GTCGCGCTCA TCACCTTTAT CCTGCTCGGC GTTCACGATC CCAAAGTCCA GGTCCAGCTT CTGGTGTGGA TCTTCGTCAT GCGCATCATG ATGCTCGTCT CCAGCGCCGG CGCGTATTTC CTGAATACGG TCATCGCCAA GGGACGCTTC GGCAACGCCG ACGAGATGAA CTTCGAGACC CCGCTCACCT CTCTGGTGTG GATCACCTCA ATCGTCTCCA TCATCCTGAC TTACATCGTT AGCAAGATGA TGATTCCCGA CCTTAGCGGT GACACCACCC TGTGGTGGAA GCTCGCCACG ATCATCTCCT GCGGCACGTT GGCAGGCGCG GTCATTCCTG AGTTCGTAAA GGTCTTCACC TCGGTGGACT CCAAGCACGT CCAGGAAGTC GTTACCTCCT CGAAAGAAGG CGGCGCCTCG CTCAACATCC TCTCCGGTCT CGTAGCCGGT AACTTCTCCG CCTACTGGCT CGGCCTCACC ATGGTCGTGT TGATGGGTGT CGGTTATTAC GTGTCTGCTT GGGGCGCGGC GGAAGGTCAC GGCCTCGGGG CGCTCATGCT CGCTCCCGCG GTCTTCGCCT TCGGACTCGT AGCCTTCGGC TTCCTCGGCA TGGGTCCTGT CACCATCGCC GTTGATTCCT ACGGCCCCGT TACCGACAAC GCGCAGTCCG TCTATGAACT CTCGTTGATC GAGAATGTGC CCAACATCGA AGCCGAACTG AAGAAGGATT TCAACATCAA CGTTAACTTC GAGCGCGCCA AGCACCTGCT CGAAGCCAAC GACGGTGCCG GCAATACCTT CAAAGCCACC GCCAAACCGG TACTGATCGG AACGGCAGTC GTCGGCGCAA CCACCATGAT CTTCTCCATC ATCATGGCGC TCACCAACGG CCTCACCACC GATGTCGGCA AGCTCTCGTT GCTGCACGCT CCGTTTGTTC TCGGCCTCAT CACTGGCGGC GCCATGATCT TCTGGTTCGC GGGCGCATCC ATCCAGGCCG TGAGCACCGG CGCTTACCGC GCGGTCGAGT TCATCAAGGC CAACATCAAA TTGGAAGGCA TCGAAAAAGC CTCCGTTGCG GACAGCAAGA AGGTCGTGGC CATCTGCACT CAGTACGCGC AGAAGGGCAT GTTCAACATC TTCCTTGCCG TCTTCTTCGG GACGCTTGCT TTCGCCTTCT TCGAGCCGTT CTTCTTTATC GGCTACCTGA TCTCCATCGC GATCTTCGGC TTGTATGAAG CCATCTTCAT GGCCAATGCC GGCGGTGCGT GGGACAACGC CAAGAAGGTC GTGGAAGTCG AACTCAAAGC CAAGGGCACG CCGCTGCACG ATGCCACCGT TGTCGGCGAC ACCGTCGGCG ATCCCTTCAA AGACACCTCT TCGGTCGCGA TGAACCCGGT GATCAAGTTC ACCACGCTCT TCGGATTGCT CGCCGTCGAA CTCGCCGTCT CGCTCGAAAA GAACGGCGGA CCGCTCGGAC GCATCCTGGC TCTGGCGTTC TTCATCGTCT CGGCGTTCTT CGTATGGCGT TCCTTCTACG GAATGCGCAT CGGTTCGCTG AAGAACGAAT AA
|
Protein sequence | MSMWHASVRR LSKSVLFINR SFISLAIFLG VLAFSSTAAF GQSEAGGEAA LKLPDLSSVS FMGVDGHKLL LIGLVFCALG LAFGLAIYMT LKNLPVHRSM LEISELIYET CKTYLTTQGK FILILWAFIA VVIAMYFGWL APVPNKPIAV TLPVILAFSL VGIAGSYGVA WFGIRVNTFA NSRTAFAGLR GKPYSIYEIP LRAGMSIGMM LISVELLIML CILLFVPADY AGPCFIGFAI GESLGAAALR IAGGIFTKIA DIGSDLMKIV FKIKEDDARN PGVIADCTGD NAGDSVGPSA DGFETYGVTG VALITFILLG VHDPKVQVQL LVWIFVMRIM MLVSSAGAYF LNTVIAKGRF GNADEMNFET PLTSLVWITS IVSIILTYIV SKMMIPDLSG DTTLWWKLAT IISCGTLAGA VIPEFVKVFT SVDSKHVQEV VTSSKEGGAS LNILSGLVAG NFSAYWLGLT MVVLMGVGYY VSAWGAAEGH GLGALMLAPA VFAFGLVAFG FLGMGPVTIA VDSYGPVTDN AQSVYELSLI ENVPNIEAEL KKDFNINVNF ERAKHLLEAN DGAGNTFKAT AKPVLIGTAV VGATTMIFSI IMALTNGLTT DVGKLSLLHA PFVLGLITGG AMIFWFAGAS IQAVSTGAYR AVEFIKANIK LEGIEKASVA DSKKVVAICT QYAQKGMFNI FLAVFFGTLA FAFFEPFFFI GYLISIAIFG LYEAIFMANA GGAWDNAKKV VEVELKAKGT PLHDATVVGD TVGDPFKDTS SVAMNPVIKF TTLFGLLAVE LAVSLEKNGG PLGRILALAF FIVSAFFVWR SFYGMRIGSL KNE
|
| |