Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1907 |
Symbol | |
ID | 4069385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2289250 |
End bp | 2289954 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983918 |
Product | hypothetical protein |
Protein accession | YP_590982 |
Protein GI | 94968934 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.469149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00905768 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATTTCCC GCATCGGGAG AAGCACTCGA CGATGCTTCC TGGTATCCCT TCGAACCACG AGGAACTCGC CTCTCCGTTC GCCCCCGCGA TCCTCTAAAA TGAACTTCAA AATGAGTGAC CTCATCGATC GCTATCGCGG AATGTCAGAC GGAGAACTCG ATCTCCTCGC GCAGGACATT CACGAACTCA CTGCTGGCGC GCAGCAGGCG CTACAGTCCG AACTCGCTCG CCGTGGTATC AACGTTCCCG ATATCTCTCA CGGTCAATGG GAATCTGAAC GCCCCGTCGT GGTTGCGAGT TTTCTGAACT TGCACGAGGC CCTGCTCGCC AAAGGACAAC TCGATTCCGC AGGTCTCGCA ACTTCGCTCG TCGACGACAA CATGGTCCGG ATCGACTGGT TCATTTCCAA CTTGCTCGGA GGCGTAAAAC TCGCAGTTCC CCCGGCCGAC GCCGACATCG CCCGCGAGAT CCTCGCGCAA CCCATCCCTG AAGATTTCGA TGTGGAAGGC GTCGGTATGT ATGAGCAGCC ACGCTGCCCG CAGTGCGATT CCCTCGACAT CAGCTATGAA TCGCTCGATA AACCGATCGC CTACGGCAGC ACCATGCTGC TCGGAGTTCC GGTACCGCTC GGCGCTAATC GCTGGCGGTG TTCTTCATGT GGACACACCT GGAAAGGCGC TACCCAGAAA GGGCCGCGCG AATAA
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Protein sequence | MISRIGRSTR RCFLVSLRTT RNSPLRSPPR SSKMNFKMSD LIDRYRGMSD GELDLLAQDI HELTAGAQQA LQSELARRGI NVPDISHGQW ESERPVVVAS FLNLHEALLA KGQLDSAGLA TSLVDDNMVR IDWFISNLLG GVKLAVPPAD ADIAREILAQ PIPEDFDVEG VGMYEQPRCP QCDSLDISYE SLDKPIAYGS TMLLGVPVPL GANRWRCSSC GHTWKGATQK GPRE
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