| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1788 |
|---|
| Symbol | |
|---|
| ID | 4071978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2168453 |
|---|
| End bp | 2169247 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637983796 |
|---|
| Product | plastocyanin-like protein |
|---|
| Protein accession | YP_590863 |
|---|
| Protein GI | 94968815 |
|---|
| COG category | [C] Energy production and conversion
[S] Function unknown |
|---|
| COG ID | [COG3794] Plastocyanin
[COG4244] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.341565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCCC GACGCACTTG GCGGATTGGG TCGCCGCTCT TGTTTCTCTT CGTCTTGATT
GCGGCGACCC TGCCGCTGTT TGGAGAAATC CCGGCACAGA CCACCGTGAC CATGCGGGAG
ATGCGATTTT CCCCGGCGAA ACTCGAGATC AACACCGGCG AAACGGTTAC GTGGATGAAC
GAAGACATTT TTTCCCACAC CGTGACCGCC GATGATGGCA GCTTCGATTC AGGATTGATC
GCACCCGGCT CCACTTGGCA GCATTCGTTC GCCAATGCAG GGTCGGTTGG GTATCACTGT
CGTCCACATC CCAATATGGC GGCAACGGTG CTCGTTTCGA TCGCTGCCGC GCAGGATCAA
ACAAGCGCAT CTCTGAAATG GGCGCCGCCG ACGGCGCCGC AACAGTTCCA TCCGATCCTG
GTGAATTTTA CCGCAGCGTT GCTGCCGCTC GCATTCCTCA GCGATCTGTT GGGACGCATG
TTTCGCCGCC CAACTTTGCA TCAAGCAGGC TGGTGGATGA CGCTCTACGC CGCCGTAATT
ACGCCACTCA CCGCACTCGC AGGATGGTGG TGGAAGCGCA GTGCCGGAGC GGATCTTCCA
CCGCACCTGG TCATGGTTCA TGCCTGGCTC GGTTCGTTCG CCGCGTTCGC GTTCATCGGT
TTGGCAGCAT GGCGATGGCG GGCTCAGAAA CTCGGAGACC CCCCGAGCAC GGCCTATCTC
ACGTGCGCTT TTGTACTGGT ACTTGCCTTG GTGTACCAGG GATCTCTTGG CGGCAGGATG
CTTTTCGGAA AATGA
|
|---|
| Protein sequence | MFARRTWRIG SPLLFLFVLI AATLPLFGEI PAQTTVTMRE MRFSPAKLEI NTGETVTWMN
EDIFSHTVTA DDGSFDSGLI APGSTWQHSF ANAGSVGYHC RPHPNMAATV LVSIAAAQDQ
TSASLKWAPP TAPQQFHPIL VNFTAALLPL AFLSDLLGRM FRRPTLHQAG WWMTLYAAVI
TPLTALAGWW WKRSAGADLP PHLVMVHAWL GSFAAFAFIG LAAWRWRAQK LGDPPSTAYL
TCAFVLVLAL VYQGSLGGRM LFGK
|
|---|
| |