Gene Acid345_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1707 
Symbol 
ID4070490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2071408 
End bp2071785 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content60% 
IMG OID637983715 
ProductPadR family transcriptional regulator 
Protein accessionYP_590782 
Protein GI94968734 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID[TIGR03433] transcriptional regulator, Acidobacterial, PadR-family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.28683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGTCGAA TGGCGACCCG AGAGAACAAT GACGAACGTA TTGCCCTGTT GCAGGGGACA 
CTAGACCTGC TCATCCTGAG AACGCTGCTG CTGGGACCCT GTCACGGACA GGGGGTAGCG
CGGTCGATTC GACGACAATC GGAGGAAGTG CTGTTTGTGG ACCACGGGTC CCTTTACGTG
GCACTGCAAC GGTTGGAAGA CCGTGGGTGG ATCCGTGCCA AGTGGGGCGT GAGTGACAAC
AACCGCAAAG CGCGATTTTA TTCGCTGACT TCGAAGGGGC GCGAACAGCT GACGGAAAAG
ACCAGCGAAT GGCGACGGCT GACGCGGGCG ATGGGCTTGA TCCTCGATGG CGCCGATGCG
CAGGGCGAGG AGGTATGA
 
Protein sequence
MGRMATRENN DERIALLQGT LDLLILRTLL LGPCHGQGVA RSIRRQSEEV LFVDHGSLYV 
ALQRLEDRGW IRAKWGVSDN NRKARFYSLT SKGREQLTEK TSEWRRLTRA MGLILDGADA
QGEEV