| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1686 |
|---|
| Symbol | |
|---|
| ID | 4069354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2043950 |
|---|
| End bp | 2045020 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637983694 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_590761 |
|---|
| Protein GI | 94968713 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.155219 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTAAAAC GGACGAAAGC GGCAGGCGAC AATCGCGGCA ACGGCACGGC TGAAAATCGA
AAGCCGAACA TCACGATTGC TGATTTGGCT GCGCACCTGA AGCTGACGAA AGGTACCATC
TCCGCGGTCC TCAACAACTC CCCGTATTCG AAGTCGATTC CGCAGCACAC CAAGGACCGC
ATTCTCGCTG CTGCTGCTGA ACTCAACTAC CAGCCAAACT TCCTTGCTCG CTCGCTCCGA
CAAAAGCGGA GCTACAGCAT CGGTGTTGTT GCCGAAGAGA TCGGCGATCC CTACAGCAGC
GTCATTATTA GCGGTATTGA GTCTGTTCTC AGCCGGATGA AGTACATCTT TCTAACGGTC
GCGCATCGAC ACGACCCGAA TCTACTTCAG CAGTACTTCG ATATCCTCCG CACCCGTGGT
GTGGAAGGGA TCATCGCGAT CGACACCCGG ATCGAGTCCT CTCCTGAACT CCCGCTCGTC
GCCGTGCCTG GCTATTCGAA ATTTGACGGC GTGCATAACA TTGTTCTGAA CCATCGAACT
GCGGCCAAAG TGGCGCTTGA ACACTTGGTT GGTCACGGCC ATCGACGAAT CGCAATCTTG
CGCGGCCAGA TCCTCAGTTC AGATTCGGCA GAGCGTTGGC ATTCGATCCA AAAGGTCGCA
CAAGAGATGT CGATCAAAAT CGATCAGGAC CTTGTGGTGC AGTTGAGTGG CGACCACGCT
TCGCCGCAAC CTGGTTTCGA GGCCATTCAC GAACTGCAAG CTCGCCACGC CAAGTACACG
GCGGTATTCG CATACAACGA CATGGCCGCG ATCGGAGCGA TCCAGGCGCT GAAGAAATTC
GGCCTGCAGG TTCCGAGCGA CGTATCAGTG GTCGGATTCG ACGATGTGCG TGAAGCGACT
TTCTACTCGC CATCTCTTAC GACGGTACGC CAACCTTTGC GCAAAATGGG CGAGACGGCC
GCGGAAACCC TCGTCGGTCG AATTGAAGGC AAGACGGATC TGCCGGCGCA CGTGGAAGTG
GAGCCGGAAT TTGTGATTCG GCAGTCCACC GGTGCAGCAC GTTCCCTCTA G
|
|---|
| Protein sequence | MVKRTKAAGD NRGNGTAENR KPNITIADLA AHLKLTKGTI SAVLNNSPYS KSIPQHTKDR
ILAAAAELNY QPNFLARSLR QKRSYSIGVV AEEIGDPYSS VIISGIESVL SRMKYIFLTV
AHRHDPNLLQ QYFDILRTRG VEGIIAIDTR IESSPELPLV AVPGYSKFDG VHNIVLNHRT
AAKVALEHLV GHGHRRIAIL RGQILSSDSA ERWHSIQKVA QEMSIKIDQD LVVQLSGDHA
SPQPGFEAIH ELQARHAKYT AVFAYNDMAA IGAIQALKKF GLQVPSDVSV VGFDDVREAT
FYSPSLTTVR QPLRKMGETA AETLVGRIEG KTDLPAHVEV EPEFVIRQST GAARSL
|
|---|
| |