| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1656 |
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| Symbol | |
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| ID | 4069804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2002212 |
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| End bp | 2003372 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983665 |
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| Product | sigma-54 activating ATPase |
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| Protein accession | YP_590732 |
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| Protein GI | 94968684 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0864275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCTC CAATCATCAA CGAACTCACC GCGAACCCGG GGGTTCTCAT TGCAAGTCCG
AACCCGGCGT TTCGTCGCCA GGTGATCGAC ACGCTGCCGA CTACCTGGCG GCCTGTACTG
GAGGCGCAGG GAGGGGCGGA CGCGCTTGGC AAGCTCGAAG CCAGCGATTG CCGAATGCTG
CTTCTCGATC GGCAGTTGCT GGACCTCGAT GTCGAGGAAT TGGCGGGACT GGTGAGACTC
CGGTATCCGG GGGTGGACGT TCAGACGCTG GAAACGCCTC GCATAAAAGG CAGCGCGGTT
GATATTCCCG AGAGGCATAG CAACATCAAC CAACTCGCGA TTGACACGCA ACTCTCACCG
CTGGATGGCA TGATCGGCAA TTCGGAGCGA ATGGGATCGG CGTATCGAGC TATCCGCAAA
GTCGCACCAC GGGACACGCC GGTATTGGTC ATGGGAGAGA CGGGCACGGG AAAAGAGCTG
GTAGCACAAG CAATTCATCG GCTCAGCCGC CGCTGTGAAA AAGCCATGGT AGTGATCAAC
TGTGCGGCCA TTCCCGAGAG TCTTTTGGAA AGCGAACTCT TTGGGTATGT CCGCGGCGCG
TTCACGGGCG CAGCACAGAC GCGGCAAGGA CGGATACAGG CGGCGAACGG GGGGACCTTG
TTCCTGGATG AAATCGGTGA GATGCCGTTC GAATTGCAGG CAAAGCTCCT CCGCTTTCTC
GAAACCGGCG AACTGCAACG CCTCGGAAGC TCTGAGACTT GGCGAGTCGA TGTGCGCTTG
GTTGCGGCGA CGAACCGGAA CCTGCGAGAG AGCGTCCAGA TGCAACGGTT TCGCGCTGAC
CTGTTCTATC GGCTTTGCGT TTTTCCGATC GTCCTACCAC CTCTGCGAGA CCGAAACGGG
GATATTTCCC AGCTTGCGAC CCACTTTCTC TCTACCTTCG ATCGCGATTG TTACTTCACC
CCGGCGGCAA TCAAGAAGCT CGACGCTCAT GACTGGCCGG GAAACGTACG CGAACTGAAG
CATGTGATCG AGAGGGCGAC TATTCTCGCG AACGACAAAG CCATCACGGT CGAGGACGTG
GTCCTCGATG CGGAAGCAGT CATGAACTAT GCAACCGATC TCAGCGTGCG GGGAGTGAAC
CATGCCGGAA CTTTCAACTG A
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| Protein sequence | MISPIINELT ANPGVLIASP NPAFRRQVID TLPTTWRPVL EAQGGADALG KLEASDCRML
LLDRQLLDLD VEELAGLVRL RYPGVDVQTL ETPRIKGSAV DIPERHSNIN QLAIDTQLSP
LDGMIGNSER MGSAYRAIRK VAPRDTPVLV MGETGTGKEL VAQAIHRLSR RCEKAMVVIN
CAAIPESLLE SELFGYVRGA FTGAAQTRQG RIQAANGGTL FLDEIGEMPF ELQAKLLRFL
ETGELQRLGS SETWRVDVRL VAATNRNLRE SVQMQRFRAD LFYRLCVFPI VLPPLRDRNG
DISQLATHFL STFDRDCYFT PAAIKKLDAH DWPGNVRELK HVIERATILA NDKAITVEDV
VLDAEAVMNY ATDLSVRGVN HAGTFN
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