| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1652 |
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| Symbol | |
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| ID | 4069800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1999522 |
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| End bp | 2001111 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983661 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_590728 |
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| Protein GI | 94968680 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.202816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCAGG AACAAAAGTT CGCGCCGCAA GGTAAGCAGA TCGCAAACTT CTTGCGAAGT
CTCACCGGAA CGCAGAAACT TTGGCTGGCG TTTGCCGGCC TAACGGTCAC GACGTTGCTA
TATGTTTTCG TGACGATGCT TGCAAAACCT GAAATGAAGC CGCTGTACAG CGGATTGCAG
GCGCAGGATG CACAAGCCCT CGGATCGAAG CTGGCTGCGC AAAAGATCGA ATATCAAATT
TCCCCCGACG GAACGAGTGT CAGTGTGGCG GTCGATAAGC TCGATTCGGC GCGCTTGTTG
GTGGCAAGCG ACGGAGGCCC GAAGAGCGGC CGCATGGGGT TCGAGTTATT CGACAAACCC
AATTGGGGGA GCAGCGACTT TAGCGAAAAG GTGAACTACC AGCGTGCCCT CGAGGGAGAA
CTCGAACGCA CGCTCAGCAC GATCGATGGC GTCGAGGCGG TGCGAGTGCA CCTGGTGTTG
CCGCGCGAGT CGTTGTTTGC GGACAAGCGC GAGGAAGCGA AGGCATCGGT CATTCTGAAG
CTACGGGGAG CCATGTCTCC GAACAGCGAC GTAGCGATTC GCCGATTTCT TGCCGGTGCA
GTGGAAGGCT TGCGGCCGGA AGGCGTGACT GTGATCGACG CAGAAAATAA TTTGCCAATC
GGAAAGACCA GTAGCGACGG GAGCGGGGTG GAATCGGAAC GCGATCAAGC GCTCGCCAAG
GAGTTAGTGC GAACGCTGGA GCCAATTGTG GGAGTAGGAG GCGCTCGCGC GAGCGTGCAC
GTTGAGTACG ACGTGACGTC GGGGGACGAG ACTCAAGAGA CCTACGATCC GAACAGCACT
GCCGCTCTCA CGATGCAGAA ATCGGAAGAA ACAGTCGGGG GCACGTTAGC ACAGGGGGTG
CCGGGAACTG CAAGCAACAT CCCGAATACA CAGAGTCCGT CCAAATCGAC GAACTCGGCA
GATTCGCAAT CGTCCAAGTC GGAGAGCGGC ACTTACGCGG TGAATCGGGT GGTTCGTCAC
ACACTCTTGC CGGCGGGCCG AATCAAACGC ATCACTGCAG CGCTCCTGGT GGATGATGCA
GACGTCACCG ATGCGATGGG GAACACCTCT CGAGCGAAGC GCAGCCCAGA GGAACTGAAG
AAGATCGATA GCCTGGCGCG AGCATCGCTC GGGATCAACG ACGCGCGCGG CGATGTCCTG
GCGGTGGAGA ACCTCTCCTT CCACGAGAAC AAGCCTGAGG TACTCGTACC TCTGACCAAG
TTGGACAAAG TAGCGCGGGT GGGCAAGCAG TTCTCCTGGA CGTTGCGCTA CGCACTCATC
GCACTTCTCT TCCTTATTGT TTATGTGGTT GTTCTACGGC CGGTTCGCAG GCAGGTGGTG
CTCTCCTTGA AGCAACTGCC GAGCCGCCCC GCGAACGACG CCGTGCTGAA TGGCAATACT
GGGAAGGTGC TTCCGCAGGG CGTTGAGTCT GCCGATCCGG CGGTGCGGCA AGCGGCCACC
CTCAAGAAGC AACTGATTGA AAAGGCCAAG GCCGAACCGG CGAGCGCGGG ACAACTTGTA
CAAAGCTGGC TACGTGAGGA AGAAGCATGA
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| Protein sequence | MAQEQKFAPQ GKQIANFLRS LTGTQKLWLA FAGLTVTTLL YVFVTMLAKP EMKPLYSGLQ
AQDAQALGSK LAAQKIEYQI SPDGTSVSVA VDKLDSARLL VASDGGPKSG RMGFELFDKP
NWGSSDFSEK VNYQRALEGE LERTLSTIDG VEAVRVHLVL PRESLFADKR EEAKASVILK
LRGAMSPNSD VAIRRFLAGA VEGLRPEGVT VIDAENNLPI GKTSSDGSGV ESERDQALAK
ELVRTLEPIV GVGGARASVH VEYDVTSGDE TQETYDPNST AALTMQKSEE TVGGTLAQGV
PGTASNIPNT QSPSKSTNSA DSQSSKSESG TYAVNRVVRH TLLPAGRIKR ITAALLVDDA
DVTDAMGNTS RAKRSPEELK KIDSLARASL GINDARGDVL AVENLSFHEN KPEVLVPLTK
LDKVARVGKQ FSWTLRYALI ALLFLIVYVV VLRPVRRQVV LSLKQLPSRP ANDAVLNGNT
GKVLPQGVES ADPAVRQAAT LKKQLIEKAK AEPASAGQLV QSWLREEEA
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