Gene Acid345_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1614 
Symbol 
ID4072540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand+ 
Start bp1956673 
End bp1957344 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID637983623 
Producthypothetical protein 
Protein accessionYP_590690 
Protein GI94968642 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.66569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGC CAGCCTTCTT CACCGCCGAT GTCTTCGACT TCCTCCGCCA CCTCAAGCGG 
AACAACAAGC GGGAATGGTT CAATCGCAAC AAAGACCGCT ACATTCAGGT CGCACAGGAT 
CCCGCGCTCC GTTTCATTAC GGCTTTCGCT GACCCGCTCG CACGCATCAG CCCGCACTTC 
GTTGCCGACG CCCGCCCTAC TCGCGGCTCG CTCTTCCGCA TTTATCGCGA CACCCGTTTC 
TCGCACGACA AGAAACCCTA CAAGACCCAC ATCGGAATCC AGTTCCGTCA CGAGAAAGGG 
AAGGACGTCC ATGCCCCCGG GTTTTATGTA CATCTGGAAC CCGATGGCTG CTTTGTAGCC 
GCCGGCATCT GGCACCCCGA TTCGCGCGCG CTCACGCAAA TTCGCGGCGC GATCGTCGCC 
CGTCCCGAAG CATGGAAGAA ATCAGTGAAG AAGCTCGAAC TCTCCGGGGA CTCGCTCACC 
CGTCCACCGA AGGGTTTCGC CGGCGATCAT CCGCTCATCG AAGATCTGAA GCGCAAAGAT 
TTCATCGCTT CGGTCGCGCT CACCGAAAAG CAGATCTCCA GCTCAGCCTG CATGCGTGAG 
ATCACGGCGG CCTGCAAGTC GATGGCGCCG CTCGTCGCGT TCACAACGAC AGCCATGGAA 
TTGAAATTCT AA
 
Protein sequence
MPEPAFFTAD VFDFLRHLKR NNKREWFNRN KDRYIQVAQD PALRFITAFA DPLARISPHF 
VADARPTRGS LFRIYRDTRF SHDKKPYKTH IGIQFRHEKG KDVHAPGFYV HLEPDGCFVA 
AGIWHPDSRA LTQIRGAIVA RPEAWKKSVK KLELSGDSLT RPPKGFAGDH PLIEDLKRKD 
FIASVALTEK QISSSACMRE ITAACKSMAP LVAFTTTAME LKF