Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1607 |
Symbol | |
ID | 4068908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1950282 |
End bp | 1951157 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637983616 |
Product | Beta-lactamase |
Protein accession | YP_590683 |
Protein GI | 94968635 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGCCC ATATGATCGT TCTTGCTGCT GCGGCCGCGA CATGCAGCCC GGAATTCCTG ACTAAGACGG TGAAGACTGC CGCCCATCCG GCCAACGGAA AGGTCGGGGT TAGCGCCAAA GTGCTGGATT CGTCGCAAAC CATATCCTTC CACGGGAACA AGAATTTCCC GATGCAGAGC GTCTACAAGC TGCCCATAGC GATCTTCACC CTACGCCGGG TGCAGGAGGG CAAGATCAAG CTCGACCAGG TCGTGAAGGT GGATGAGGAC GATCTCATCC CCGCAGCCGG CAATAGCCCC CTACGCGACA AGCATCCACG CGGCGGCGAA TTCACCATCG AGGACCTGCT GCGGCGAGCG ATTGTGGACA GCGATGGTTC GGCTTCGGAT GTCCTGCTGA AACAGATTGG CGGTACGCGA GAGGTGCGTC GGTATTTGAA GTCGCAGAAG ATCAAAGGCA TCCGAGTGCA GCACACGGAA GAGCAGTTGA TCGAGAACAC GCACTTGCAG TATTCCGACT CGGCGAAACC TGACGCGATG GTGGATCTAC TCGAGCGTCT CCAGCAAGGC AAGCTGCTGG ATACGGAAAA CACCGCGCGC CTCGTGGGAT GGATGAAGGA GACGGACACT GGAAAAGACC GCATCCGGGC GAAGCTGCCG TCAGGAACTG TTGCCGATAA AACAGGAAGT TCGGGTACGA AGGATGGTCT GACTCCAGCG ACGAACGACG TCGCACTCGT GACCTTGCCG AACGGGAACC ACTTCGCGAT CGCGATCTTC GTTACGGATT CGAAGGCTGA TACGAAGACG AGAAACCTTG TAATCGCCAA TATTGCGCAT GAGGTTTGGA GTTGCTGGGC GGAGGAGACG AAATGA
|
Protein sequence | MLAHMIVLAA AAATCSPEFL TKTVKTAAHP ANGKVGVSAK VLDSSQTISF HGNKNFPMQS VYKLPIAIFT LRRVQEGKIK LDQVVKVDED DLIPAAGNSP LRDKHPRGGE FTIEDLLRRA IVDSDGSASD VLLKQIGGTR EVRRYLKSQK IKGIRVQHTE EQLIENTHLQ YSDSAKPDAM VDLLERLQQG KLLDTENTAR LVGWMKETDT GKDRIRAKLP SGTVADKTGS SGTKDGLTPA TNDVALVTLP NGNHFAIAIF VTDSKADTKT RNLVIANIAH EVWSCWAEET K
|
| |