| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1573 |
|---|
| Symbol | |
|---|
| ID | 4069011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1921816 |
|---|
| End bp | 1922826 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637983582 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_590649 |
|---|
| Protein GI | 94968601 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.209685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0518858 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCA CCGGGATTGT CGCTGCGCTC ATCCTGCTCG CTGGAATGGC GGGCACGGTT
GCTTCTTCGC GGCAACTCGA CAAGATGACC GACCAGATCG CGGTGCAGGA GGTGTTGTAT
CTACCCTCGG CGAACACGGT GAAAGCAATC AGCCTTGGCT ACGACGGTTT GATGGCCGAC
ATCTATTGGA CGCGCGTAGT GCAGTACTTC GGCCGGAAGC ACCTGGAAGA GGCGCAGGCC
TATAAGCTGC TGCCGGGACT TCTGGATATC ACGACGACGC TCGATCCACA TCTCGTGGTG
GCTTATCAGT TCGGGGCGTT CTTCCTTTCG CAGAAGCCGC CACAGGGCGC TGGTTCTCCC
GATGCAGCCA TCGCGCTGGT GAAGAAAGGG ATTGAAAACA ATCCTGAATA TTGGCGCCTG
TATTACGACC TGGGATTCAT CTACTGGCTG GAGAAAAAGG ATCCTAAATC GGCGGCTGAT
GCATTTGAAG CGGGCTCGAA GGTTCCCGGA GCTCAGCCGT GGATGCGTAC TATGGCAGCT
TCCATGGCCA CTGGGGCGAA CGATCTTGCG ACTGCCCGCA CACTGTGGAC GGAGATTCTG
AACGATACGA AAGATCAGGA TATCCGCGCG AATGCAATAA AGCGGTTGAT GTGTGTGGAT
TCCGATGAGG TTGTGATCCA GATCCAGAAA TATGTGGATA TGTTCAAAGA GCGTTCCGGA
CACAGTGCGT CCAGCATGCG AGAACTGGTC GATGCCGGTA TATTCAATCG AGTTCCGGTC
GACCCTACGG GCAGGCCGTA TGAGATCGAT TCTTACGGCC GGGTTGTGGT CAAGGATCCC
AAAGCCCTTC CATTCATCAC CCAAGGGTTG CCGCACGGGC AGGAAGTGAA CTACATCTTC
GACATCTACG CAATGCAGGA GCGCGGTAAG CGGCTTGAGG AAGAGAAGCG GAAAAAAGAA
GCGGAAGAGA AATCCTCGGG CTCCGCATCG CGTCCAAATA ATCAGCAATA G
|
|---|
| Protein sequence | MNRTGIVAAL ILLAGMAGTV ASSRQLDKMT DQIAVQEVLY LPSANTVKAI SLGYDGLMAD
IYWTRVVQYF GRKHLEEAQA YKLLPGLLDI TTTLDPHLVV AYQFGAFFLS QKPPQGAGSP
DAAIALVKKG IENNPEYWRL YYDLGFIYWL EKKDPKSAAD AFEAGSKVPG AQPWMRTMAA
SMATGANDLA TARTLWTEIL NDTKDQDIRA NAIKRLMCVD SDEVVIQIQK YVDMFKERSG
HSASSMRELV DAGIFNRVPV DPTGRPYEID SYGRVVVKDP KALPFITQGL PHGQEVNYIF
DIYAMQERGK RLEEEKRKKE AEEKSSGSAS RPNNQQ
|
|---|
| |