Gene Acid345_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1436 
Symbol 
ID4071625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1735246 
End bp1736151 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content59% 
IMG OID637983445 
ProductDMT family permease 
Protein accessionYP_590512 
Protein GI94968464 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.529495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCGCT CCCTCAAAGC CCACATCCTT CTGATCGCCG TCACCTTCGT TTGGGGCTCG 
ACCTTCGTTC TGATCAAGGC CGCGCTCGCC GACGTCACAC CGCTGCTCTT CAACGCAGTC
CGCATGACGC TCGCCGGCCT CGCCCTCGGC CTCGTCTACT GGAAAGCTTT GCGCAAGATG
AATCGCGCCG AGTTCATCGA CGGTATGCTC GTCGCGCTCA TGATGTACTT CGGCTATGAA
TTCCAGACCT CTGGCTTAAA GTTGACCACG CCCTCGAAGT CCGCGCTTCT CACTGGCATG
TCCGTCGTCC TCGTGCCGCT GATCCTCCAC TTCGGATGGC GCAAACACGT CAGCAAGTGG
ACCATTTTCG GCGTCCTGAT CGCCTGCGTC GGTCTCTTCC TCCTCACCGT TCCAGCCGGC
ACGAGCCGTG GCTTCTCTTT AACTGAAATG AATCTCGGCG ATCTGCTCAG CATGGGTTGC
GCCGTCTGTT TCGCATTTCA AATCATCCTC GTCGGACGCG CTAGCGAACG TCACGGCTTC
GAACCGATCG CCTTCCTGCA AGTCGCCGGT GCCGCCGTCC TGATGTTTGC GACGGTTCCC
ATCGCCGAAC ACGCCCACGT GACATGGAGT TCCACCGTCA TCTGGGCGAT CCTTGTCACT
GGCCTTCTCG GCACCGCGGC AGCATTCACG GTGCAAGCCT GGGCGCAGCA GTTCATGCCG
GCGACGAATA CCGCGTTAAT TTTTCTCTTG GAGCCGGTTT TTGCTTGGGC CACTTCGTTC
GTCATCCTCC ACGAACGCCT CAACTCTCGC TCCTCGCTTG GGGCTGTGTT GATCCTCGTT
GGCGTGGTTC TCTCGGAATT GTTGGGCAGC CAAGACCACC CCTCGGAGGA GATCAGGGTC
TCATAG
 
Protein sequence
MSRSLKAHIL LIAVTFVWGS TFVLIKAALA DVTPLLFNAV RMTLAGLALG LVYWKALRKM 
NRAEFIDGML VALMMYFGYE FQTSGLKLTT PSKSALLTGM SVVLVPLILH FGWRKHVSKW
TIFGVLIACV GLFLLTVPAG TSRGFSLTEM NLGDLLSMGC AVCFAFQIIL VGRASERHGF
EPIAFLQVAG AAVLMFATVP IAEHAHVTWS STVIWAILVT GLLGTAAAFT VQAWAQQFMP
ATNTALIFLL EPVFAWATSF VILHERLNSR SSLGAVLILV GVVLSELLGS QDHPSEEIRV
S