| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0827 |
|---|
| Symbol | |
|---|
| ID | 4072353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1027105 |
|---|
| End bp | 1027863 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637982836 |
|---|
| Product | ABC aliphatic sulfonate transporter, inner membrane subunit |
|---|
| Protein accession | YP_589906 |
|---|
| Protein GI | 94967858 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.819281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAG CCCTGCAACA AATCGCGTTT TACTCCACGC TGCTCGTGCT CTGGGAATCT
GTAGCGCTCC TGAAACTTTG GCCGCCGTAC CTGTTTCCGA CGCCGCTGAC AGTATTCGAA
TCGCTGCGAG CGGGATTCAG CGACCACAGT TTCTGGATCG GCATAACAGT CAGCATGAAG
CGCGTGGCAA TCGGCTACGC GATCTCCTGC CTCCTCGGCG TTGGCCTCGG ATTTCTGATT
ACCTACAGTC GCTTCCTGTC GGAAACTGCC GGACGACTCA TCGTCAGCCT GCAGAGCATT
CCGAGTATCT GTTGGCTACC GGTTGCCATC TTGTGGTTTG GACTCACAGA GAAGGCGATT
TTGTTTGTGG TGGTGATGGG ATCTCTCCTG GCAATCACCA TATCGGTGGA GTCCGGCTTG
CGAAGCATAC CGAAGATCTA CTCGCTCGCC GGCCGCAATC TCGGCGCCAA TGGATGGAAG
TTAATGGTCC ACGTGCTGCT GCCAGCGAGC CTTCCGTACT TAATCTCCGG GCTTAAGCAG
GGATGGGCGT TCGCATGGCG CTCGTTGATC AGCGGCGAAA TGATCTTCGT AACTCTCGGC
CTGGGTCAGT TGTTGATGAT GGGCCGCGAC CTCAACGACA TCAGCCAGGT CTTCGCCGTG
ATGCTCCTCA TCGTCGCGCT CGGTTGGCTG GTGGACACGC TCTTTTTCCG CGGACTCGAA
CGCGCCGTGC AGCGCCGATG GGGATTCGCG ACGCCCTAA
|
|---|
| Protein sequence | MRKALQQIAF YSTLLVLWES VALLKLWPPY LFPTPLTVFE SLRAGFSDHS FWIGITVSMK
RVAIGYAISC LLGVGLGFLI TYSRFLSETA GRLIVSLQSI PSICWLPVAI LWFGLTEKAI
LFVVVMGSLL AITISVESGL RSIPKIYSLA GRNLGANGWK LMVHVLLPAS LPYLISGLKQ
GWAFAWRSLI SGEMIFVTLG LGQLLMMGRD LNDISQVFAV MLLIVALGWL VDTLFFRGLE
RAVQRRWGFA TP
|
|---|
| |