| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0514 |
|---|
| Symbol | |
|---|
| ID | 4069934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 632535 |
|---|
| End bp | 634850 |
|---|
| Gene Length | 2316 bp |
|---|
| Protein Length | 771 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637982519 |
|---|
| Product | alpha-1,2-mannosidase, putative |
|---|
| Protein accession | YP_589593 |
|---|
| Protein GI | 94967545 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
|---|
| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0135562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTCGATC GAAGAACCTT CCTGCGCGGA CTCTCACTGC TTCCCTTTCT TCGCACGCCT
GATTTGCCGC TGATGGCACA AAGCAGCGCT CCCAAATCTT CTGATGATGA CCTCACCCGC
TTCGTAAACA TTTTCATTGG CACCGGCGGC CACGGGCATA CATATCCCGG CGCGACAGTT
CCCTTTGGCA TGGTGCAGCT CAGCCCAGAC ACCTATAACG ACGGCTGGGA CTGGTGTTCC
GGATATCACC ATTCCGACGC CTCGATCATG GGCTTCAGCC ATACACACCT GAGTGGAACA
GGCGCTGCCG ACATGCTCGA CTTCCTGCTC ATGCCTGGCA CCGGCTCCGC GAAGCTGGTG
CCTGGCTCGC GCGAAAATCC CGGCGAAGGC TATCGCTCAC GCTTCAGCCA CGCGGATGAA
ACCGCGACAC CCGGCTACTA CTCCGTGCTT CTGCGCGACT ACAACATCCG CGCTGAACTC
ACCGCCACGG AACGCGTGGG CATGCACAAG TACACCTTCC CAGCGAGCGA CTCGAGTCAC
TTCATCCTCG ATCTCGCGCA CGTGATCGGT ATCGATCCGA AGGTCATCGA GTGGGCGGAG
TTGAAAGTTA CAGGGCCCGA TACGATCGTC GGCGGGCGCT CGATCAACGG ATGGGCCACA
GGCCGCGAGC TGTACTTCGC GATGAAATTT TCGAAACCAT TCGCTTCAGT GGAACTGTTT
TCCGACGACA AAAAAGTGGA TGGTCGCGAA ACGCGAGGGA ATATCCTCAA ACTGCTCGTG
CACTATCAAA CTGCGGCCGG GAAGCCGATC TTCGTCAAGA CGGCGCTAAG CGGGGTCAGT
ACAGAAGGCG CCCTTAAAAA TCTCGAGAGC GAGATTCCGA GCTGGGATTT CGACGGCGTT
CGCCGCACGG CGCATGAATC GTGGAGGAAG TCGCTCGCGC GGATCCGCAT TGAGACCAAG
GATGCGCGGC AACGCGAGAT CTTTTATACA AGCCTCTACC ACACCATGGT CGCGCCCACG
CTTTTCGATG ACGTGGATGG GCAATACCGC GGCATGGATG GCAAGGTCCA TCAACTCTCA
AAGGGCGCGC ACAACTACAG TACGTTTTCG TTGTGGGACA CATTTCGCGC GGCGCATCCG
CTCTATACGC TGGCGCTCGC CGACCGGGTG CCTGATTTCG TGAATTGTCT GATTAGGATG
TGCGAAGAGA GTCCCGCCGG GCCGCCGGTG TGGCCGCTGC AAGCGAAGGA AACCGGAACC
ATGACCGGCT ATCACTCGGC ATCGGTGATT GCGGAAGCGT ATGTCAAAGG GTTCAGCGGC
ATCGATTTCG CGAAATGTTA TCCCGCAATG CGTCGCCGCG CGATGGACGA TGATTATCGC
GGCATGCCCT ACTATCGGAA GCTCGGCTAC ATCCCATGCG ACAAGGAAGA AGAGTCGTGT
AGCAAGCAGG TCGAGTACTC GTATAACGAC TGGGCGGTGG CACAAATTGC ACGCGCGGCC
GGCGCGTCTG CCGATGAAAA GCTACTGTTA CAACGCATGC ACAATTATCG GCACCTCTTC
GACAAGAGCG TCGGCTTCAT TCGACCGAAG CTGGAAAACG GCGAGTGGTC TGAGCCGTTC
ACGTCGAACG AGATGGGCCA CTCCAAACAA TGGCGCGATT ACACCGAGTC CGATCCATGG
CAGACAACGT TCACCGTGCA ACACGACGTC GGCGGCTACA TGGAGCTGTT CGGCGGACGC
AAAGCATTCG TCGCTAAACT CGACAAACTC TTTACGGAGA ACTCGCAGCT TCCTCCCGAC
GCGCCACCCG ACATCGCCGG TATGGTCGGC CAGTACGCGC ATGGCAACGA GCCTTGCCAT
CACATGGCAT ACCTGTATTG CTACGCGTCG GCGCCTCAGA AAACGCAGGC GCTCGTCCGG
CGGCTACTCG AAATGGAATA TGACAATCAG CCCAACGGAC TCGCCGGCAA TGAGGATTGC
GGGCAAATGT CCGCCTGGTA CGTCATGAGC GCGCTCGGCT TCTACGCTGT GGATCCCGTA
AGTGGCAACT ACGTATTCGG CTCACCGTTG TTTGACCGCG CTGAGATTCA GTTGCGCGAC
AAAACAATTC TGCGGATCGA GGTGAAGCGC ACATCGCCAG CCGATGTGTA CATTCAGTCC
ATCACCCTGA ACGGTGAGCC ATATGACAAG ATCTGGTTCC GCCATGCCGA TATTGCGCAT
GGTGGAACGA TCGTCTTCAC GATGGGCGGC GCGCCGAGTC CGCAGTTCGG AAAAACGGAT
AGCACGCTAC CGCCTGGACT CCCTCCGGCT AATTGA
|
|---|
| Protein sequence | MFDRRTFLRG LSLLPFLRTP DLPLMAQSSA PKSSDDDLTR FVNIFIGTGG HGHTYPGATV
PFGMVQLSPD TYNDGWDWCS GYHHSDASIM GFSHTHLSGT GAADMLDFLL MPGTGSAKLV
PGSRENPGEG YRSRFSHADE TATPGYYSVL LRDYNIRAEL TATERVGMHK YTFPASDSSH
FILDLAHVIG IDPKVIEWAE LKVTGPDTIV GGRSINGWAT GRELYFAMKF SKPFASVELF
SDDKKVDGRE TRGNILKLLV HYQTAAGKPI FVKTALSGVS TEGALKNLES EIPSWDFDGV
RRTAHESWRK SLARIRIETK DARQREIFYT SLYHTMVAPT LFDDVDGQYR GMDGKVHQLS
KGAHNYSTFS LWDTFRAAHP LYTLALADRV PDFVNCLIRM CEESPAGPPV WPLQAKETGT
MTGYHSASVI AEAYVKGFSG IDFAKCYPAM RRRAMDDDYR GMPYYRKLGY IPCDKEEESC
SKQVEYSYND WAVAQIARAA GASADEKLLL QRMHNYRHLF DKSVGFIRPK LENGEWSEPF
TSNEMGHSKQ WRDYTESDPW QTTFTVQHDV GGYMELFGGR KAFVAKLDKL FTENSQLPPD
APPDIAGMVG QYAHGNEPCH HMAYLYCYAS APQKTQALVR RLLEMEYDNQ PNGLAGNEDC
GQMSAWYVMS ALGFYAVDPV SGNYVFGSPL FDRAEIQLRD KTILRIEVKR TSPADVYIQS
ITLNGEPYDK IWFRHADIAH GGTIVFTMGG APSPQFGKTD STLPPGLPPA N
|
|---|
| |