| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0351 |
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| Symbol | |
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| ID | 4069593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 384937 |
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| End bp | 385482 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982354 |
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| Product | PHA accumulation regulator DNA-binding-like |
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| Protein accession | YP_589430 |
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| Protein GI | 94967382 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.583326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.398285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCCCG CCCGCGTCGT CGTCAAAAAG TATCCAAACC GCAGACTCTA CGACACTTCC
GCCAGCGCCT ACGTCAACCT CGATGACATC GCCCGCATGG TCCGAAACGG GAAAGACGTG
CAAGTCGTGG ACGCCCTCAC CAGCGAAGAC CTCACCCGCG TCGTTCTCAC CCAGATCATT
GTCGAAGACA CCAAGGGCCA GCCCACCGGC CTCCCCCTCG AGTTGCTCCG ACAGTTAATC
GTCGCCTCCG ATCACGCCGG CAAAGAATTC ATCATGTGGT ACCTGCGCTC CGCCTTCGAC
GCCTACCAGA AAATGCAGGG CACCCTGCAA TCCGGAATCG CCGGCATCAA AGACGTTGCC
ACCTCACCAG TCGATACCCT CCGCAACTTC CTCCGCGGCC CCGATCGTCC CACGGCACCA
CCAGATGAAA CCGAAGAACT CCGCCACCGC ATCGCCGACC TCGAATCCCG CCTCGCAAAG
CCAAAGAAGC GCACAGCAAA GAAGAAGCCC TCGAAATCAC CAAAGAAGAA ACGGCCAAAC
CGCTGA
|
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| Protein sequence | MNPARVVVKK YPNRRLYDTS ASAYVNLDDI ARMVRNGKDV QVVDALTSED LTRVVLTQII
VEDTKGQPTG LPLELLRQLI VASDHAGKEF IMWYLRSAFD AYQKMQGTLQ SGIAGIKDVA
TSPVDTLRNF LRGPDRPTAP PDETEELRHR IADLESRLAK PKKRTAKKKP SKSPKKKRPN
R
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