| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0348 |
|---|
| Symbol | |
|---|
| ID | 4069590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 381763 |
|---|
| End bp | 382770 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637982351 |
|---|
| Product | Alpha/beta hydrolase |
|---|
| Protein accession | YP_589427 |
|---|
| Protein GI | 94967379 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.665109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.220005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCAG TTCCACGTTT CCGCGGGCCC TATCGACACA AGTGCAGGAG GATTTGTTCG
CTGGCTATCG CACGCGCGAC GGCACACCGG CTGAGCCTTG GAGCAAGACG AAAAAGTTGG
AACTGGGCGG TGGAGGTTGG GACCGCCGTG ATACGCGAGC AGTTGATTGC GGCATTCAAA
CTGCCGACTG CAGAAGAACA AAGAAAATTT CTCGACTGCA TGGTGCTGGA GGTTCCGGCG
CCACAGAAGG TCGCGCGAGA AGAAGCTGTG GAGTCGAACT TTCGCGGAAC GTGGTTCCTG
CCGGAAAAGC CTGTGGACCG GACGCTGCTT TATCTGCATG GTGGCGGGTT CGCGTGTTAT
CCGAAAGAGT CGTATGCGGA GTTTCTCCCG TTGATTGCGT TGGCGGCGAA TGCCCGGACG
TTTGCACTGG ACTATCGGTT GGCGCCGGAG CATCCGTTCC CGGCGGCGCT CGACGATGCG
CGGAGAGCTT ATCTATGCCT GCTGGAACTC GGGGTGGATC CGCGGCGAAT GGTCGTCGGA
GGGGATTCGG CGGGCGGGAA CATGACGCTG TCGTTGCTGC CGCAGCTGCG CGATGCGGGG
ATTCCATTGC CGGCACTGGG GATTGCACTT TCGCCTGCGA CGGAATTCGA TGTGGAGCGG
CCGAGCCTGC ATCACGACGA AGCTGATTGG ATTACCGGCA GAATGGCGGA GACTTGGCGC
GATTGGTACT GTCGCGAGGA AGAGCGAGGC GATCCGCGGG TTTCGCCGAT CCATGCGGAC
ATGCGCGGGC TGCCGCCGAT TTATATCCAA GCCGGCGAGG CGGAGATTCT TTACGACAGT
ATCGTGGCCT TCGCCGAAGA AGCGAAACGC CAGAGCGCCG ACGTCACGCT GGAAGCGTGG
GAAGACATGA ACCATGTTTT CCAGTTCTTC GGCTACAACG CTCCGCAAAG CTCGGCTGCG
CTGAAGCGCA TTACCGAAGT GATCGAACAG CATTTGCCTT CCGCCTGA
|
|---|
| Protein sequence | MLPVPRFRGP YRHKCRRICS LAIARATAHR LSLGARRKSW NWAVEVGTAV IREQLIAAFK
LPTAEEQRKF LDCMVLEVPA PQKVAREEAV ESNFRGTWFL PEKPVDRTLL YLHGGGFACY
PKESYAEFLP LIALAANART FALDYRLAPE HPFPAALDDA RRAYLCLLEL GVDPRRMVVG
GDSAGGNMTL SLLPQLRDAG IPLPALGIAL SPATEFDVER PSLHHDEADW ITGRMAETWR
DWYCREEERG DPRVSPIHAD MRGLPPIYIQ AGEAEILYDS IVAFAEEAKR QSADVTLEAW
EDMNHVFQFF GYNAPQSSAA LKRITEVIEQ HLPSA
|
|---|
| |