Gene Acid345_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0271 
Symbol 
ID4068815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp282306 
End bp283292 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content64% 
IMG OID637982272 
ProductOmpA/MotB family outer membrane protein 
Protein accessionYP_589350 
Protein GI94967302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.672755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCC ATTTCCTGAT CGCGCTTCCG CTGGCAGCAA CTTTGGCATT GCCCGCCCTG 
GCGCAAAATA CCGCCTCGAC CCCAAGTGAC AATCAGAAGC CCGCTGCCAC CGCCCCTGCG
GCGCAGGACA GCAGCTCGCA GGCCGCGCAG AACAACAATG GCGTGACCCC CGCGCAGGAA
CAGGGCATGG CGGCCCACCA GCCGCTGCAG CCGGATACCC ACGAAGGTTT CTGGGGCCAT
CTGAATCCGT TCGCGCGCAA GAAGTACGTT CAGCGCCAGA TGTCGCCGAT CCGCGACCGC
GTCAACGAGC TCGATGAGCT GACCGCGAAG AACTCCAAGG ACATTAAAGA CGTCGACGCC
CGCGCTCAGG AAGGCATCCG CATCGCCTCC GCCAAGGCGA ACGAAGCCGA CCAGCACGCG
CTCGACGCCG GCAACCGCGC CCAGCAGGCC AACACCACCG CGACCCAGGC CAGCCAGCAC
CTCCAGACCG TCCAGACCAC GGTTGAGAAC ATTGACCAGT ACAAAGAGGC CTCGAACATC
GAGATCCGCT TCCGTCCTGG CCAGAGCGTG CTGAGCAAGA AGGCGAAAGA GTCGCTCGAC
GACATGTCGA AGGGCCTCGC CGACCAGAAG GGCTACATCG TGGAAGTGCA GGGCTTCGCT
CCCGGTCACG GCCGCGTAGC GGTTGAGAAC TCGCAGCGCA TCGCCGACGA AGTGGTCCGC
TACCTTGTAA TCAACTCGAA CGTCCCGGTC TACCGCATCT ACACCATGGG CATGGGCAAC
GCGAAGGTCC AGGCGACCTC GGCCACGGCA GATTCCAAGC CGAAGTACAC CAAGGGCGGC
CGCGTCGAGA TCAGCCTGCT CCAGAACAGC CTCGGCCAGA TGGCTTCAGC CAGCACCATG
CCGCAGTCTG ATGCGAACAG CACCGCAGCC CCGGCAGCTC CGGCGCAGCA GAGTGCTCCG
CAGCAACCCG CGACTCCGCA GCAGTAA
 
Protein sequence
MKSHFLIALP LAATLALPAL AQNTASTPSD NQKPAATAPA AQDSSSQAAQ NNNGVTPAQE 
QGMAAHQPLQ PDTHEGFWGH LNPFARKKYV QRQMSPIRDR VNELDELTAK NSKDIKDVDA
RAQEGIRIAS AKANEADQHA LDAGNRAQQA NTTATQASQH LQTVQTTVEN IDQYKEASNI
EIRFRPGQSV LSKKAKESLD DMSKGLADQK GYIVEVQGFA PGHGRVAVEN SQRIADEVVR
YLVINSNVPV YRIYTMGMGN AKVQATSATA DSKPKYTKGG RVEISLLQNS LGQMASASTM
PQSDANSTAA PAAPAQQSAP QQPATPQQ