| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0207 |
|---|
| Symbol | |
|---|
| ID | 4069676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 220569 |
|---|
| End bp | 221549 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637982207 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_589286 |
|---|
| Protein GI | 94967238 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.311208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTG CACAATTTCA CTGGCCAACG TTGCCTTGCA CGGTAGCTGG GGTCAGCCGT
GTGCTGGTAC TCGTATTTGC GCTGCTTGTG ACGCGCGGGG CTCATGCCCA AGACCTGACG
CCTCGGGCCT ACCTGATCAC TCCGCTCCAT GGCAACGCAA TCACGATGAG CTACTCCTAT
TTCAACGGTG CGCTTGATTT CAACAATGTT GTTCCGATTA CCGATGGGTC CGGCGAGTTC
AGTGTGCCGT CGGTCGCCTA CTATCACTCC TTCAACTTCT TTGGCCGCTC CGCCAACTTC
CTCGCCGCGC TGCCCTACGG TGTCGGGAAC TTTGAGGGCC TTGTGCTTGG CCGACAGCGC
AACGGCTACC GATCCGGCCT GCTGGACTCG GTGTACCGGG TATCCGTGAA CCTCAAGGGC
GGACCTGCGA TGGAACTGCC GGAGTTCATG AAGTGGAAGC AGAAAACTTT GCTGGGTGTG
AGCCTGAAGG TTGTGGCTCC CACCGGCCAG TACAACCCGG ATTTGCTGAT CAACTGGGGC
ACCAATCGTT GGGCCTTCAA GCCGGAGTTC GGCTATTCGC GGCGCTTTAG CGAAAAGTGG
GTGCTCGACG CTTATGCCGG TGCGTGGTTC TTTACCGACA ACTCGCAGTT TTTCTCAGTT
ACCCCTCCTC CGGCCGTCCA ATCGTTGAGC CCGATCGGGT CTTTCGAGGG ACATCTCAGC
CGCAATTTCA CGCGCAACCC TCTTCTCTGG GCGTCGCTCG ACGGTAACTT CTGGTTCGGA
GGGCAGGCGT CGAACAACAA TGTGCCGGTC AACGGTACCC GGCAGACCGC GTCGCGCATT
GGCGGTACGG GATCGTTTCC GCTGACGAAG TCCCAGTCGA TCAAGGTCAG CTTCAACAGC
GGGGCTTATG TTCGCTTCGG CGGGAACTAT AAGAACCTAT CAGTAGGGTG GCAGTACGCC
TGGTTTGGGC ACCCGAAATG A
|
|---|
| Protein sequence | MSRAQFHWPT LPCTVAGVSR VLVLVFALLV TRGAHAQDLT PRAYLITPLH GNAITMSYSY
FNGALDFNNV VPITDGSGEF SVPSVAYYHS FNFFGRSANF LAALPYGVGN FEGLVLGRQR
NGYRSGLLDS VYRVSVNLKG GPAMELPEFM KWKQKTLLGV SLKVVAPTGQ YNPDLLINWG
TNRWAFKPEF GYSRRFSEKW VLDAYAGAWF FTDNSQFFSV TPPPAVQSLS PIGSFEGHLS
RNFTRNPLLW ASLDGNFWFG GQASNNNVPV NGTRQTASRI GGTGSFPLTK SQSIKVSFNS
GAYVRFGGNY KNLSVGWQYA WFGHPK
|
|---|
| |