| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0128 |
|---|
| Symbol | |
|---|
| ID | 4071716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 136144 |
|---|
| End bp | 136734 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637982128 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_589207 |
|---|
| Protein GI | 94967159 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.168138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0601393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTG CGAAACAGAA ATCTGCAAAT GTCTCGCATC TCCGCAGCCA GGAGATCCGC
GACGAACGTG TGCGCCGCAC CCGCGCCCGT ATCGACAGCG GCTTTGTTCA GTTGCTGCAT
CGCCGCCGCT ACGGCGACAT CCGTATCAGC GACATCTGCA AGAAGGCCGC CGTCGGACGC
GCCACCTTCT ACGCTCACTA CGCCACGAAA GACGATCTCC TGCGCTCCCA GTTCGAACGC
ATCGTCGCTC CCATGCTGAT CATCAAGCCA AATTCACCAT GCGTGATCTA TGCCACACCG
TTCTTCGGGC ACATCCAACA AATGCCCGAC ATCTTCGGCG CCTTCATGGG CCCGCGCGGC
GGAACCGCAC CGTTAGTCCT GCGCGAGTGC TTCGAAGCTC GCGCGCGCCA GGCAATCGAC
CTCGATCGCC TCACCGGCTT ACGCAAGAGC GCGCTCGCAC GCTTCATCGC CGCGACTCTG
CTCACCGTCA TCGAGTGCTG GCTCGAGAAC GGTTCCCGTG AAACTCCCAA CGAACTGCAA
GACCTCTTCA GCTCGCTGAT CACTCCCGCA ATCGTCTCCG CGAATCGCTG A
|
|---|
| Protein sequence | MALAKQKSAN VSHLRSQEIR DERVRRTRAR IDSGFVQLLH RRRYGDIRIS DICKKAAVGR
ATFYAHYATK DDLLRSQFER IVAPMLIIKP NSPCVIYATP FFGHIQQMPD IFGAFMGPRG
GTAPLVLREC FEARARQAID LDRLTGLRKS ALARFIAATL LTVIECWLEN GSRETPNELQ
DLFSSLITPA IVSANR
|
|---|
| |