Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0066 |
Symbol | |
ID | 4068979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 65299 |
End bp | 66486 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637982066 |
Product | histidine kinase |
Protein accession | YP_589145 |
Protein GI | 94967097 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.126071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACC TCGACCGTGA TCTACGCGTT CTGGTACTGG CTCCCACCGG GCGGGATGCG GAACTTATAT CCGACCTGCT AACGAGCAAG GGTATCCGTT GCGAGCAGCC GGGAACGTTG GCGATGGCCC GAATCGAGAT GGCTGCGGGC GTAGGCGCCT TGCTGGTAGC GGAAGAGACG CTCACATTGC CGGAAATTAC GGCGTGGGCG GCACAGGTAG CGCTACAACC ATCATGGTCG GACTTCCCAA TCATTCTTTT GACAATGTCC GGAGAGGTTG ACGAGGAGAG TCAAAGGAGA TCGCTGCTTC GGAAGCCGCT CGGCAACGTG GTACTACTGG AACGGCCGGC GCGGCCTGAG ACTCTGGTGA GCACAGTGCA GGCAGCTTTG CGCAGCCGTC GCCGGCAGTA CCAGATGCGG GATTACTTGG CAGTTCAGCG GCTGGCAGAA GAAGCGTTGC GAAAGTCCGA AAAACTGGCG GTGGTTGGAC GGTTGGCCGC GAGCATGGCT CACGAAATCA ACAACCCTTT GGCATCTGTG ACCAATCTTC TGTATCTGAT GGGCCAGTCT GGAAGCCTGT GGGAGTGCCA GGAATATGCA CAGACAGCGG GACGCGAACT CGCGCGTGTT TCCGAAATCG TCACCCAGAC CTTACGGATA TACCATCAGA CAGGCAGGCC TGAACTGGTT AGCCCAGCAG AAATTGTGAA TTCCGCACTG AACCTTTTCC GCGCGAGATT GACGGCAGCT CAGATCGTGG TGCAAACGGA TTTTCGCGAG TGTCGGCCTG TGCTGGCGAT GGGCGCCGAA CTCAGGCAGC TAATCCTCAA CATGATAGGA AATGCGCTGG ATGCGATGCG AACGGGGGGA ATGCTGAAAA TTCGAGTCGC GGCGAGCAGC GAACGCAGCA ACGGCTCCCG TCCCGGCGTG CGAGTCACGA TTGCAGATTC CGGATCGGGG ATTCATCCTG CCATCAAGGA GCAGTTGTTT GAACCTTTTG TCAGCACCAA GGGCGACACC GGAGCGGGTC TGGGGCTGTG GGTGAGCTCC GAAATCGTCC GTAAACATAG TGGAAAAATC CAGGTGAGAA GCAGCGTCTC GCCACCCGCT GCGGGGACTG TTTTCTCGAT ATTTCTTCCC GAGCGGCCGC ACTTCGAATC CAGGGTCTTC TTTGCAAGAG CTGTCTAA
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Protein sequence | MNNLDRDLRV LVLAPTGRDA ELISDLLTSK GIRCEQPGTL AMARIEMAAG VGALLVAEET LTLPEITAWA AQVALQPSWS DFPIILLTMS GEVDEESQRR SLLRKPLGNV VLLERPARPE TLVSTVQAAL RSRRRQYQMR DYLAVQRLAE EALRKSEKLA VVGRLAASMA HEINNPLASV TNLLYLMGQS GSLWECQEYA QTAGRELARV SEIVTQTLRI YHQTGRPELV SPAEIVNSAL NLFRARLTAA QIVVQTDFRE CRPVLAMGAE LRQLILNMIG NALDAMRTGG MLKIRVAASS ERSNGSRPGV RVTIADSGSG IHPAIKEQLF EPFVSTKGDT GAGLGLWVSS EIVRKHSGKI QVRSSVSPPA AGTVFSIFLP ERPHFESRVF FARAV
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