Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0034 |
Symbol | |
ID | 4071739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 30366 |
End bp | 30665 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637982034 |
Product | type I antifreeze protein |
Protein accession | YP_589113 |
Protein GI | 94967065 |
COG category | [S] Function unknown |
COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.080792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTCTCT ACGAATACGA GTGCAAACAG TGCCGCGAGC GTTTTGAAAA GATCCAGAAG TTCTCGGACG AGCCCGAAAA AGTCTGCCCA AAGTGCGGCG GCGAGGTCGA ACGCCTGCTG AGCGCTCCCG CCGTGCAATT CAAGGGCGAA GGCTGGTACG TAACCGACTA CGCGAAGAAA AAGGGTGGCG CGGCCAAAAG CAGCTCAACC GACTCCACTT CTTCAGAAAA GAAATCGGAG AGTGCCCCAG CATCCGCGGA GACGCCGAAG CCTTCCACCA GTTCCGACAA GAAATCCTAA
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Protein sequence | MPLYEYECKQ CRERFEKIQK FSDEPEKVCP KCGGEVERLL SAPAVQFKGE GWYVTDYAKK KGGAAKSSST DSTSSEKKSE SAPASAETPK PSTSSDKKS
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