| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Achl_2697 |
|---|
| Symbol | rpoB |
|---|
| ID | 7294173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter chlorophenolicus A6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011886 |
|---|
| Strand | - |
|---|
| Start bp | 3021587 |
|---|
| End bp | 3025096 |
|---|
| Gene Length | 3510 bp |
|---|
| Protein Length | 1169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643591107 |
|---|
| Product | DNA-directed RNA polymerase subunit beta |
|---|
| Protein accession | YP_002488751 |
|---|
| Protein GI | 220913442 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
|---|
| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.275742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTCGCCT CGAGCACCTC TAATAACGAA ACCGCTAACA CCGCCGACAG CACTGATGGT
GCCACTCGCC GGCTCTCATT CGCAAAGATT CACGAACCCC TTGATGTTCC GAATCTGCTT
GCCCTGCAGA CGGACAGCTT TGACTGGCTC GTCGGCAACG AACGCTGGCA GGCACGCGTA
GCGAAGGCCG TCGAAGAAAA CGATCTCAGC GTCGCTACGA CGTCCGGCCT GTCGGACATC
TTCGAAGAGA TCTCCCCGAT CGAGGATTTC CAGGGCACCA TGTCCCTGAG CTTCTCCGAT
CCGGAGTTCG CTGACCCCAA GTACACCATG GCCGAATGCA AGGACCGGGA CGCTACCTAC
TCGGCTCCGC TGTACGTCAA GGCCGAGTTC ATGAACAACA ACACGGGCGA AATCAAGCAG
CAGACCGTGT TCATGGGCGA CTTCCCGCTG ATGACCGAGA AGGGTACCTT CGTGGTCAAC
GGCACCGAGC GTGTCGTCGT CTCCCAGCTG GTCCGTTCGC CGGGCGCCTA CTTTGAGCGC
GCCGCTGACA AGACCAGTGA CAAGGACATC TTCACGGCCA AGATCATCCC GTCCCGCGGT
GCATGGTTTG AGCTCGAGAT CGACAAGCGC GATCAGGTCG GTGTCCGCCT CGACCGCAAG
CGCAAGCAGT CCGTCACTGT TCTGCTGAAG GCCCTCGGCT GGACCGAAGG CCAGATCCTC
GAAGAGTTCG GCCAGTACGA CTCCATGCGC GCGACGCTGG AGAAGGACGC CACCGAAACG
CGCGAAGACG CCCTGCTGGA CATCTACCGC AAGCTGCGTC CGGGCGAGCC GCCCACAGTC
GAGGCTGCCC AGTCCCTGCT GGACAACCTG TACTTCAACT CCAAGCGCTA CGATCTGGCC
AAGGTTGGCC GCTACAAGAT CAACCGCAAG CTGGGCATCG ACCGCTCCCT TGGCGACAAG
GAAGCCTCGG TCCTGCACGT TGAAGACATC GTTGCCATGA TCAAGTTCCT CGTTGCGCTG
CACGCCGGCG AGAAGACCAT CAAGGGCACC CGCGACGGCC AGGAAGTGGA TCTGCGCGTC
GAAATCGACG ACATCGACCA CTTCGGCAAC CGCCGCATCC GCGCCGTCGG CGAGCTCATC
GAGAACCAGG TCCGCACCGG CCTGTCCCGC ATGGAGCGCG TTGTCCGCGA GCGTATGACC
ACCCAGGACG TCGAGGCCAT CACGCCGCAG ACCCTGATCA ACATCCGCCC CGTCGTGGCA
GCCATCAAGG AGTTCTTCGG AACTTCGCAG CTGTCGCAGT TCATGGACCA GAACAACCCG
CTCTCGGGCC TGACCCACAA GCGCCGCCTC TCGGCCCTTG GCCCCGGTGG TCTGTCCCGT
GACCGCGCCG GCATGGAAGT CCGTGACGTG CACCCGTCCC ACTACGGACG TATGTGCCCC
ATCGAAACTC CTGAAGGCCC GAACATTGGC CTGATCGGGT CGCTGGCATC CTACGGACGC
ATCAACCCGT TCGGCTTCAT CGAGACGCCG TACCGCCTGG TCAAGGACGG CGTCGTGTCC
GACGACGTCC AGTACCTGAC GGCCGACGAC GAGGCTGAGG TCCTGATCGC CCAGGCCAAC
GCGCCGCTGG ACGAAAACAA GCGCTTCGCT GAAGAGACCG TCCTGGTCCG TGCCCGCGGT
GGTGGAGGCG AGCCCGTTCT GGTTCCCGCC GCCGACGTCG AGTTCATGGA CGTCTCCCCG
CGCCAGATGG TGTCCGTGGC TACGGCCCTG ATCCCGTTCC TCGAGCATGA CGATGCCAAC
CGTGCACTCA TGGGTGCCAA CATGCAGCGC CAGGCCGTGC CGCTGGTCCG TTCCGAAGCC
CCGTTCGTGG GTACCGGCAT GGAGCGCGCC GCAGCCGTCG ACGCCGGTGA CGTCACCATC
GCCAAGAAGG CCGGTGTGGT CACCGAGGTC TCCGCCGAGC TGGTCATCAT GCTCAACGAT
GACGGCACGG AAACCAACTA CCGCATCAAC AAGTTCGCAC GCTCCAACCA GGGCAACTGC
TACAACAACC GCGTCCTGGT TAACGAAGGC CAGCGCCTGG AGGTCGGCGG CATCATCGCT
GACGGCCCGG CAACGGACCA GGGCGAGCTC GCCCTGGGCA AGAACCTGCT CGTGGCATTC
ATGTCATGGG AAGGCCACAA CTTCGAGGAC GCCATCATCC TCTCGCAGCG CATCGTTGCC
GAGGATGTCC TTTCCTCCAT CCACATCGAG GAGCACGAGA TCGATGCCCG CGACACCAAG
CTTGGTGCCG AGGAAATCAC CCGTGACATC CCCAACGTGT CCGAGGAAGT CCTGGCAGGC
CTGGACGAGC GCGGCATCAT CCACATCGGT GCCGAGGTTG AAGCCGGCGA CATCCTGGTC
GGAAAGGTCA CCCCGAAGGG TGAAACCGAA CTGACCCCGG AAGAGCGCCT GCTGCGCGCC
ATCTTCGGTG AGAAGTCCCG CGAAGTGCGC GACACCTCCC TCAAGGTGCC CCACGGCGAG
TCCGGCACCG TCATCGGTGT CCGCGTCTTC GACCGCGACA ACGACGACGA GCTGCCCCCG
GGCGTGAACC AGCTGGTCCG CGTCTACGTG GCCGCCAAGC GCAAGATCAC CGACGGCGAC
AAGCTCGCCG GCCGCCACGG CAACAAGGGT GTTATCTCCA AGATCCTCCC GATCGAGGAC
ATGCCCTTCC TTGCCGACGG CACCCCCGTT GACATCGTCC TGAACCCGCT GGGTGTTCCG
GGCCGTATGA ACGTGGGCCA GGTGCTCGAA ACGCACCTCG GCTGGGTTGC CAAGACCGGC
TGGAAGATCG AAGGTGAGCC CGAGTGGGTC AAGCAGCTGC CGAACCTGCC CCGCGAGAGT
GGTCCCACCA CTGTTGCAAC GCCGGTGTTC GACGGTGCCC GCGAAGAGGA AATCACGGGC
CTGCTCGATT CCACCAACGT GACCCGCGAC GGTGACCGCC TGATCAACTC CTCCGGCAAG
ACCCGCCTGT TTGACGGCCG CTCCGGCGAG CCGTTCCCGG ATCCGATCTC GGTCGGCTAC
ATGTACATCC TGAAGCTCCA CCACCTGGTG GACGACAAGA TCCACGCCCG CTCCACCGGC
CCGTACTCCA TGATCACGCA GCAGCCGCTG GGTGGTAAGG CACAGTTCGG TGGCCAGCGC
TTTGGTGAAA TGGAAGTGTG GGCCCTCGAA GCCTACGGCG CCGCTTACAC GCTCCAGGAA
CTCCTCACCA TCAAGTCCGA TGACATCCAC GGCCGCGTCA AGGTCTACGA AGCCATCGTC
AAGGGCGAGA ACATCCCGGA GCCGGGCGTT CCCGAATCCT TCAAGGTCTT GATCAAGGAA
ATGCAGTCGC TGTGCCTGAA CGTGGAAGTG CTTTCCACGG ACGGAACCAC AATTGAAATG
CGTGACTCTG ATGACGCAGT CTTCACGGCT GCGGAAGAAC TGGGCATCGA TCTGTCTCGC
GCAGAGCCCA GCTCCGTAGA AGAGGTCTAG
|
|---|
| Protein sequence | MVASSTSNNE TANTADSTDG ATRRLSFAKI HEPLDVPNLL ALQTDSFDWL VGNERWQARV
AKAVEENDLS VATTSGLSDI FEEISPIEDF QGTMSLSFSD PEFADPKYTM AECKDRDATY
SAPLYVKAEF MNNNTGEIKQ QTVFMGDFPL MTEKGTFVVN GTERVVVSQL VRSPGAYFER
AADKTSDKDI FTAKIIPSRG AWFELEIDKR DQVGVRLDRK RKQSVTVLLK ALGWTEGQIL
EEFGQYDSMR ATLEKDATET REDALLDIYR KLRPGEPPTV EAAQSLLDNL YFNSKRYDLA
KVGRYKINRK LGIDRSLGDK EASVLHVEDI VAMIKFLVAL HAGEKTIKGT RDGQEVDLRV
EIDDIDHFGN RRIRAVGELI ENQVRTGLSR MERVVRERMT TQDVEAITPQ TLINIRPVVA
AIKEFFGTSQ LSQFMDQNNP LSGLTHKRRL SALGPGGLSR DRAGMEVRDV HPSHYGRMCP
IETPEGPNIG LIGSLASYGR INPFGFIETP YRLVKDGVVS DDVQYLTADD EAEVLIAQAN
APLDENKRFA EETVLVRARG GGGEPVLVPA ADVEFMDVSP RQMVSVATAL IPFLEHDDAN
RALMGANMQR QAVPLVRSEA PFVGTGMERA AAVDAGDVTI AKKAGVVTEV SAELVIMLND
DGTETNYRIN KFARSNQGNC YNNRVLVNEG QRLEVGGIIA DGPATDQGEL ALGKNLLVAF
MSWEGHNFED AIILSQRIVA EDVLSSIHIE EHEIDARDTK LGAEEITRDI PNVSEEVLAG
LDERGIIHIG AEVEAGDILV GKVTPKGETE LTPEERLLRA IFGEKSREVR DTSLKVPHGE
SGTVIGVRVF DRDNDDELPP GVNQLVRVYV AAKRKITDGD KLAGRHGNKG VISKILPIED
MPFLADGTPV DIVLNPLGVP GRMNVGQVLE THLGWVAKTG WKIEGEPEWV KQLPNLPRES
GPTTVATPVF DGAREEEITG LLDSTNVTRD GDRLINSSGK TRLFDGRSGE PFPDPISVGY
MYILKLHHLV DDKIHARSTG PYSMITQQPL GGKAQFGGQR FGEMEVWALE AYGAAYTLQE
LLTIKSDDIH GRVKVYEAIV KGENIPEPGV PESFKVLIKE MQSLCLNVEV LSTDGTTIEM
RDSDDAVFTA AEELGIDLSR AEPSSVEEV
|
|---|
| |